Evidence map›Paper›PMID 23687299›Full record

ArticleThe Journal of biological chemistry2013

Structural insights into Aβ42 oligomers using site-directed spin labeling.

Lei Gu, Cong Liu, Zhefeng Guo

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed.

  1. Review
  2. Article
  3. Amyloid Precursor Protein and Alzheimer's Disease.International journal of molecular sciences · 2023
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Lipid membranes induce structural conversion from amyloid oligomers to fibrils.Biochemical and biophysical research communications · 2021
    Article
  9. Segmental structural dynamics in Aβ42 globulomers.Biochemical and biophysical research communications · 2021
    Article
  10. Article
  11. Article
  12. Alzheimer's Aβ42 and Aβ40 form mixed oligomers with direct molecular interactions.Biochemical and biophysical research communications · 2021
    Article
  13. Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Lei GuDepartment of Neurology, Brain Research Institute, Molecular Biology Institute, UCLA, Los Angeles, California 90095, USA.
Cong Liu
Zhefeng Guo

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Oligomerization of the 42-residue peptide Aβ42 plays a key role in the pathogenesis of Alzheimer disease. Despite great academic and medical interest, the structures of these oligomers have not been well characterized. Site-directed spin labeling combined with electron paramagnetic resonance spectroscopy is a powerful approach for studying structurally ill-defined systems, but its application in amyloid oligomer structure study has not been systematically explored. Here we report a comprehensive structural study on a toxic Aβ42 oligomer, called globulomer, using site-directed spin labeling complemented by other techniques. Transmission electron microscopy shows that these oligomers are globular structures with diameters of ∼7-8 nm. Circular dichroism shows primarily β-structures. X-ray powder diffraction suggests a highly ordered intrasheet hydrogen-bonding network and a heterogeneous intersheet packing. Residue-level mobility analysis on spin labels introduced at 14 different positions shows a structured state and a disordered state at all labeling sites. Side chain mobility analysis suggests that structural order increases from N- to C-terminal regions. Intermolecular distance measurements at 14 residue positions suggest that C-terminal residues Gly-29-Val-40 form a tightly packed core with intermolecular distances in a narrow range of 11.5-12.5 Å. These intermolecular distances rule out the existence of fibril-like parallel in-register β-structures and strongly suggest an antiparallel β-sheet arrangement in Aβ42 globulomers.

Indexed as

Alzheimer DiseaseAmyloid beta-PeptidesAnimalsCell SurvivalCircular DichroismElectron Spin Resonance SpectroscopyHeLa CellsHumansMicroscopy, Electron, TransmissionPC12 CellsPeptide FragmentsProtein FoldingProtein Structure, SecondaryRatsSpin LabelsTetrazolium SaltsAmyloid beta-Peptidesamyloid beta-protein (1-42)Peptide FragmentsSpin LabelsTetrazolium SaltsThiazolesthiazolyl blueAlzheimer DiseaseAmyloidElectron Paramagnetic ResonanceEPRESRProtein AggregationProtein MisfoldingProtein Self-assemblySpin Labeling

Identifiers

PMID23687299
PMCPMC3696641

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.