Evidence map›Paper›PMID 23686273›Full record

ArticleApplied and environmental microbiology2013

Identification of critical genes for growth in olive brine by transposon mutagenesis of Lactobacillus pentosus C11.

G Perpetuini, H Scornec, R Tofalo, P Serror, M Schirone, G Suzzi, A Corsetti, J F Cavin, H Licandro-Seraut

Open access · bronzeAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Review
  3. Resistance to host antimicrobial peptides mediates resilience of gut commensals during infection and aging inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  4. Article
  5. Review
  6. Selection ofMicroorganisms · 2022
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. A systems biology approach to investigate the antimicrobial activity of oleuropein.Journal of industrial microbiology & biotechnology · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

G PerpetuiniDipartimento Scienze degli Alimenti, Università di Teramo, Teramo, Italy.
H Scornec
R Tofalo
P Serror
M Schirone
G Suzzi
A Corsetti
J F Cavin
H Licandro-Seraut
University of Teramo · ITUniversité de Bourgogne · FRAgroParisTech · FRInstitut Agro Dijon · FRInstitut Pasteur · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Olive brine represents a stressful environment due to the high NaCl concentration, presence of phenolic compounds known as antimicrobials, and low availability of nutrients. Thus, only a few strains of lactic acid bacteria (LAB) are adapted to grow in and ferment table olives. To identify the mechanisms by which these few strains are able to grow in olive brine, Lactobacillus pentosus C11, a particularly resistant strain isolated from naturally fermented table olives, was mutagenized by random transposition using the P(junc)-TpaseIS1223 system (H. Licandro-Seraut, S. Brinster, M. van de Guchte, H. Scornec, E. Maguin, P. Sansonetti, J. F. Cavin, and P. Serror, Appl. Environ. Microbiol. 78:5417-5423, 2012). A library of 6,000 mutants was generated and screened for adaptation and subsequent growth in a medium, named BSM (brine screening medium), which presents the stressful conditions encountered in olive brine. Five transposition mutants impaired in growth on BSM were identified. Transposition occurred in two open reading frames and in three transcription terminators affecting stability of transcripts. Thus, several essential genes for adaptation and growth of L. pentosus C11 in olive brine were identified.

Indexed as

DNA Transposable ElementsDNA, BacterialFermentationFood MicrobiologyGene LibraryLactobacillusMultiplex Polymerase Chain ReactionMutagenesisOleaReverse Transcriptase Polymerase Chain ReactionSaltsSodium ChloridebrineDNA, BacterialDNA Transposable ElementsSaltsSodium Chloride

Identifiers

PMID23686273
PMCPMC3719503
OpenAlexW2132163777

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.