Evidence map›Paper›PMID 23685071›Full record

ArticleMolecular cell2013

Feedforward regulation ensures stability and rapid reversibility of a cellular state.

Andreas Doncic, Jan M Skotheim

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 64 citations in OpenAlex.

  1. Article
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  14. Fundamental trade-offs between information flow in single cells and cellular populations.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Review
  16. Article
  17. Network motif-based method for identifying coronary artery disease.Experimental and therapeutic medicine · 2016
    Article
  18. Article
  19. Article
  20. Cell-Size Control.Cold Spring Harbor perspectives in biology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Andreas DoncicDepartment of Biology, Stanford University, Stanford, CA 94305, USA.
Jan M Skotheim
Stanford University · US

Funding

Mechanisms of restriction point response to dynamic growth factor signalsR01GM092925 · NIGMS · STANFORD UNIVERSITY · PI SKOTHEIM, JAN M · 2010 to 2018
$2.8M
NIGMS NIH HHS GM092925NIGMS NIH HHS R01 GM092925
6 · The paper itself

Abstract

Cellular transitions are important for all life. Such transitions, including cell fate decisions, often employ positive feedback regulation to establish and stabilize new cellular states. However, positive feedback is unlikely to underlie stable cell-cycle arrest in yeast exposed to mating pheromone because the signaling pathway is linear, rather than bistable, over a broad range of extracellular pheromone concentration. We show that the stability of the pheromone-arrested state results from coherent feedforward regulation of the cell-cycle inhibitor Far1. This network motif is effectively isolated from the more complex regulatory network in which it is embedded. Fast regulation of Far1 by phosphorylation allows rapid cell-cycle arrest and reentry, whereas slow Far1 synthesis reinforces arrest. We expect coherent feedforward regulation to be frequently implemented at reversible cellular transitions because this network motif can achieve the ostensibly conflicting aims of arrest stability and rapid reversibility without loss of signaling information.

Indexed as

Feedback, PhysiologicalAlgorithmsCell Cycle CheckpointsCyclin-Dependent Kinase Inhibitor ProteinsCyclinsMAP Kinase Signaling SystemModels, BiologicalProtein PrecursorsProtein StabilitySaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsTranscription, GeneticCLN1 protein, S cerevisiaeCLN2 protein, S cerevisiaeCyclin-Dependent Kinase Inhibitor ProteinsCyclinsFAR1 protein, S cerevisiaeMF(ALPHA)1 protein, S cerevisiaeProtein PrecursorsSaccharomyces cerevisiae Proteins

Identifiers

PMID23685071
PMCPMC3696412
OpenAlexW1968611560

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.