Evidence map›Paper›PMID 23684523›Full record

ArticleAnalytical biochemistry2013

Quantification of branched-chain keto acids in tissue by ultra fast liquid chromatography-mass spectrometry.

Kristine C Olson, Gang Chen, Christopher J Lynch

Abstract read
In one paragraph

Article in Analytical biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 40 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kristine C OlsonDepartment of Cellular and Molecular Physiology, Penn State College of Medicine, Hershey, PA 17033, USA.
Gang Chen
Christopher J Lynch
Pennsylvania State University · US

Funding

Role of Leucine Metabolism in Leucine SignalingR01DK062880 · NIDDK · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI LYNCH, CHRISTOPHER JOHN · 2003 to 2010
$2.8M
Adipose Organ Transplant for Treatment of Maple Syrup Urine DiseaseR21DK091784 · NIDDK · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI LYNCH, CHRISTOPHER JOHN · 2011 to 2012
$421k
NIDDK NIH HHS DK062880NIDDK NIH HHS DK091784NIDDK NIH HHS R01 DK062880NIDDK NIH HHS R21 DK091784
6 · The paper itself

Abstract

Branched-chain keto acids (BCKAs) are associated with increased susceptibility to several degenerative diseases. However, BCKA concentrations in tissues or the amounts of tissue available are frequently at the limit of detection for standard plasma methods. To accurately and quickly determine tissue BCKAs, we have developed a sensitive ultra fast liquid chromatography-mass spectrometry (UFLC-MS) method. BCKAs from deproteinized tissue extractions were o-phenylenediamine (OPD) derivatized, ethyl acetate extracted, lyophilized in a vacuum centrifuge, and reconstituted in 200 mM ammonium acetate. Samples were injected onto a Shimadzu UFLC system coupled to an AB-Sciex 5600 Triple TOF mass spectrometer instrument that detected masses of the OPD BCKA products using a multiple reaction monitoring method. An OPD-derivatized (13)C-labeled keto acid was used as an internal standard. Application of the method for C57BL/6J (wild-type) and PP2Cm knockout mouse tissues, including kidney, adipose tissue, liver, gastrocnemius, and hypothalamus, is shown. The lowest tissue concentration measured by this method was 20 nM, with the standard curve covering a wide range (7.8-32,000 nM). Liquid chromatography-mass spectrometry run times for this assay were less than 5 min, facilitating high throughput, and the OPD derivatives were found to be stable over several days.

Indexed as

Adipose TissueAnimalsChromatography, LiquidHypothalamusKeto AcidsKidneyLiverMass SpectrometryMiceMice, Inbred C57BLMice, KnockoutMuscle, SkeletalPhosphoprotein PhosphatasesProtein Phosphatase 2CTissue DistributionKeto AcidsPhosphoprotein PhosphatasesProtein Phosphatase 2C2-Keto-3-methylvalerate2-Ketoisocaproate2-KetoisovalerateBranched-chain α-keto acidMaple syrup urine diseaseUltra fast liquid chromatography–mass spectrometry

Identifiers

PMID23684523
PMCPMC3887392
OpenAlexW2020879595

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.