Evidence map›Paper›PMID 23682113›Full record

ArticleJournal of experimental botany2013

Iron-dependent modifications of the flower transcriptome, proteome, metabolome, and hormonal content in an Arabidopsis ferritin mutant.

Damien Sudre, Elain Gutierrez-Carbonell, Giuseppe Lattanzio, Rubén Rellán-Álvarez, Frédéric Gaymard, Gert Wohlgemuth, Oliver Fiehn, Ana Alvarez-Fernández, Angel M Zamarreño, Eva Bacaicoa and 6 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 61 citations in OpenAlex.

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  14. Horticulture research · 2019
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 4 institutions in 5 countries.

Damien SudreBiochimie et Physiologie Moléculaire des Plantes, Centre National de la Recherche Scientifique, Institut National de la Recherche Agronomique, Université Montpellier 2, SupAgro. Bat 7, 2 place Viala, 34060 Montpellier cedex 1, France. briat@supagro.inra.fr
Elain Gutierrez-Carbonell
Giuseppe Lattanzio
Rubén Rellán-Álvarez
Frédéric Gaymard
Gert Wohlgemuth
Oliver Fiehn
Ana Alvarez-Fernández
Angel M Zamarreño
Eva Bacaicoa
Daniela Duy
Jose-María García-Mina
Javier Abadía
Katrin Philippar
Ana-Flor López-Millán
Jean-François Briat
Consejo Superior de Investigaciones Científicas · ESInstitut National de la Recherche Agronomique · MALudwig-Maximilians-Universität München · DEUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Iron homeostasis is an important process for flower development and plant fertility. The role of plastids in these processes has been shown to be essential. To document the relationships between plastid iron homeostasis and flower biology further, a global study (transcriptome, proteome, metabolome, and hormone analysis) was performed of Arabidopsis flowers from wild-type and triple atfer1-3-4 ferritin mutant plants grown under iron-sufficient or excess conditions. Some major modifications in specific functional categories were consistently observed at these three omic levels, although no significant overlaps of specific transcripts and proteins were detected. These modifications concerned redox reactions and oxidative stress, as well as amino acid and protein catabolism, this latter point being exemplified by an almost 10-fold increase in urea concentration of atfer1-3-4 flowers from plants grown under iron excess conditions. The mutant background caused alterations in Fe-haem redox proteins located in membranes and in hormone-responsive proteins. Specific effects of excess Fe in the mutant included further changes in these categories, supporting the idea that the mutant is facing a more intense Fe/redox stress than the wild type. The mutation and/or excess Fe had a strong impact at the membrane level, as denoted by the changes in the transporter and lipid metabolism categories. In spite of the large number of genes and proteins responsive to hormones found to be regulated in this study, changes in the hormonal balance were restricted to cytokinins, especially in the mutant plants grown under Fe excess conditions.

Indexed as

MetabolomeTranscriptomeArabidopsisArabidopsis ProteinsElectrophoresis, Gel, Two-DimensionalFerritinsFlowersGene Expression Regulation, PlantIronMass SpectrometryMutationPlant Growth RegulatorsProteomeArabidopsis ProteinsFerritinsIronPlant Growth RegulatorsProteomeFerritinflowersfunctional genomicsiron.

Identifiers

PMID23682113
PMCPMC3697946
OpenAlexW2135953782

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.