Evidence map›Paper›PMID 23681726›Full record

ArticleChemistry & biodiversity2013

Screening the biosphere: the fungicolous fungus Trichoderma phellinicola, a prolific source of hypophellins, new 17-, 18-, 19-, and 20-residue peptaibiotics.

Christian René Röhrich, Anita Iversen, Walter Michael Jaklitsch, Hermann Voglmayr, Andreas Vilcinskas, Kristian Fog Nielsen, Ulf Thrane, Hans von Döhren, Hans Brückner, Thomas Degenkolb

Open access · greenAbstract read
In one paragraph

Article in Chemistry & biodiversity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Pathogenicity ofPathogens (Basel, Switzerland) · 2023
    Article
  5. Article
  6. Diversity of Linear Non-Ribosomal Peptide in Biocontrol Fungi.Journal of fungi (Basel, Switzerland) · 2020
    Review
  7. Article
  8. New 19-Residue Peptaibols fromMicroorganisms · 2018
    Article
  9. Hyporientalin A, an anti-Candida peptaibol from a marine Trichoderma orientale.World journal of microbiology & biotechnology · 2018
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 4 countries.

Christian René RöhrichFraunhofer Institute for Molecular Biology and Applied Ecology IME, Bioresources Project Group, Winchesterstrasse 2, D-35394 Giessen. christian.roehrich@ime.fraunhofer.de
Anita Iversen
Walter Michael Jaklitsch
Hermann Voglmayr
Andreas Vilcinskas
Kristian Fog Nielsen
Ulf Thrane
Hans von Döhren
Hans Brückner
Thomas Degenkolb
Justus-Liebig-Universität Gießen · DETechnical University of Denmark · DKUniversity of Vienna · ATFraunhofer Institute for Molecular Biology and Applied Ecology · DETechnische Universität Berlin · DE

Funding

Austrian Science Fund FWF P 22081
6 · The paper itself

Abstract

To investigate the significance of antibiotics for the producing organism(s) in the natural habitat, we screened a specimen of the fungicolous fungus Trichoderma phellinicola (syn. Hypocrea phellinicola) growing on its natural host Phellinus ferruginosus. Results revealed that a particular group of non-ribosomal antibiotic polypeptides, peptaibiotics, which contain the non-proteinogenic marker amino acid, α-aminoisobutyric acid, was biosynthesized in the natural habitat by the fungicolous producer and, consequently, released into the host. By means of liquid chromatography coupled to electrospray high-resolution time-of-flight mass spectrometry, we detected ten 20-residue peptaibols in the specimen. Sequences of peptaibiotics found in vivo were independently confirmed by analyzing the peptaibiome of an agar plate culture of T. phellinicola CBS 119283 (ex-type) grown under laboratory conditions. Notably, this strain could be identified as a potent producer of 39 new 17-, 18-, and 19-residue peptaibiotics, which display the same building scheme as the 20-residue peptaibols found in the specimen. Two of the 19-residue peptaibols are tentatively assigned to carry tyrosinol, a novel C-terminal residue, as deduced from high-resolution tandem mass-spectrometry data. For the new peptaibiotics produced by T. phellinicola, the name 'hypophellin(s)', based on the teleomorph name, is introduced.

Indexed as

Amino Acid SequenceAminoisobutyric AcidsChromatography, LiquidMass SpectrometryMolecular Sequence DataPeptaibolsTrichodermaAminoisobutyric AcidsPeptaibols

Identifiers

PMID23681726
PMCPMC3734673
OpenAlexW2109560075

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.