Evidence map›Paper›PMID 23681439›Full record

ArticleEMBO reports2013

Introns of plant pri-miRNAs enhance miRNA biogenesis.

Dawid Bielewicz, Malgorzata Kalak, Maria Kalyna, David Windels, Andrea Barta, Franck Vazquez, Zofia Szweykowska-Kulinska, Artur Jarmolowski

Open access · hybridAbstract read
In one paragraph

Article in EMBO reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 59 papers.

0numbers the graph read from it
0cells of the map it votes in
59citing papers in PubMed
17.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

59 citing papers in PubMed, 114 citations in OpenAlex.

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  14. Du13 encodes a CPlant biotechnology journal · 2022
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  16. InFrontiers in plant science · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Dawid BielewiczDepartment of Gene Expression, Faculty of Biology, Adam Mickiewicz University, Umultowska Street 89, 61-614 Poznan, Poland.
Malgorzata Kalak
Maria Kalyna
David Windels
Andrea Barta
Franck Vazquez
Zofia Szweykowska-Kulinska
Artur Jarmolowski
Adam Mickiewicz University in Poznań · PLUniversity of Basel · CHMax Perutz Labs · ATMedical University of Vienna · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plant MIR genes are independent transcription units that encode long primary miRNA precursors, which usually contain introns. For two miRNA genes, MIR163 and MIR161, we show that introns are crucial for the accumulation of proper levels of mature miRNA. Removal of the intron in both cases led to a drop-off in the level of mature miRNAs. We demonstrate that the stimulating effects of the intron mostly reside in the 5'ss rather than on a genuine splicing event. Our findings are biologically significant as the presence of functional splice sites in the MIR163 gene appears mandatory for pathogen-triggered accumulation of miR163 and proper regulation of at least one of its targets.

Indexed as

Gene Expression Regulation, PlantIntronsAlternative SplicingArabidopsisArabidopsis ProteinsMethyltransferasesMicroRNAsMutationPoly APseudomonas syringaeRNA PrecursorsArabidopsis ProteinsMethyltransferasesMicroRNAsMIRN163 microRNA, ArabidopsisPoly ARNA PrecursorsS-adenosyl-L-methionine-dependent N-methyltransferase

Identifiers

PMID23681439
PMCPMC3701235
OpenAlexW2162905664

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.