Evidence map›Paper›PMID 23678001›Full record

ArticleThe Journal of biological chemistry2013

Identification of a highly conserved surface on Tat variants.

Sonia Mediouni, Albert Darque, Isabelle Ravaux, Gilbert Baillat, Christian Devaux, Erwann P Loret

Abstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Sonia MediouniAix Marseille Université, Unité Mixte de Recherche (UMR) 5236 CNRS, Equipe Technologique de Recherches Appliquées sur le VIH-1 (ETRAV), Faculté de Pharmacie, 27 BD Jean Moulin, 13385 Marseille Cedex 5, France.
Albert Darque
Isabelle Ravaux
Gilbert Baillat
Christian Devaux
Erwann P Loret

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Extracellular Tat is suspected to protect HIV-1-infected cells from cellular immunity. Seropositive patients are unable to produce neutralizing antibodies against Tat, and Tat is still secreted under antiviral treatment. In mice, the Tat OYI vaccine candidate generates neutralizing antibodies such as the mAb 7G12. A peptide called MIMOOX was designed from fragments of Tat OYI identified as the possible binding site for mAb 7G12. MIMOOX was chemically synthesized, and its structure was stabilized with a disulfide bridge. Circular dichroism spectra showed that MIMOOX had mainly β turns but no α helix as Tat OYI. MIMOOX was recognized by mAb 7G12 in ELISA only in reduced conditions. Moreover, a competitive recognition assay with mAb 7G12 between MIMOOX and Tat variants showed that MIMOOX mimics a highly conserved surface in Tat variants. Rat immunizations with MIMOOX induce antibodies recognizing Tat variants from the main HIV-1 subtypes and confirm the Tat OYI vaccine approach.

Indexed as

Protein Structure, TertiaryAIDS VaccinesAnimalsAntibodies, MonoclonalAntibodies, NeutralizingBinding, CompetitiveBinding SitesCircular DichroismComputational BiologyConserved SequenceEnzyme-Linked Immunosorbent AssayEpitope MappingHeLa CellsHIV-1HumansImmunity, CellularAIDS VaccinesAntibodies, MonoclonalAntibodies, NeutralizingPeptidestat Gene Products, Human Immunodeficiency VirusCellular Immune ResponseEpitope MappingHIV-1Protein DesignTatVaccineVaccine Development

Identifiers

PMID23678001
PMCPMC3696680

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.