Evidence map›Paper›PMID 23677696›Full record

ArticleMolecular and cellular biochemistry2013

VAMP4 is required to maintain the ribbon structure of the Golgi apparatus.

Akiko Shitara, Toru Shibui, Miki Okayama, Toshiya Arakawa, Itaru Mizoguchi, Yasunori Sakakura, Yasunori Shakakura, Taishin Takuma

Erratum issuedAbstract read
In one paragraph

Article in Molecular and cellular biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Sorting endosomes play key roles in presentation ofbioRxiv : the preprint server for biology · 2025
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Golgi Structure and Function in Health, Stress, and Diseases.Results and problems in cell differentiation · 2019
    Review
  12. Article
  13. Canine Salivary Glands: Analysis of Rab and SNARE Protein Expression and SNARE Complex Formation With Diverse Tissue Properties.The journal of histochemistry and cytochemistry : official journal of the Histochemistry Society · 2017
    Article
  14. Article
  15. Review
  16. Article
  17. Indirect Immunofluorescence on Frozen Sections of Mouse Mammary Gland.Journal of visualized experiments : JoVE · 2015
    Article
  18. Article
  19. Do SNARE Protein Isoforms Determine Fusion Pore Characteristics?The Journal of neuroscience : the official journal of the Society for Neuroscience · 2015
    Article
  20. Review
4 · The record

Corrections and comments

  • Erratum issued
    Shakakura, Yasunori [corrected to Sakakura, Yasunori]
5 · Who and what money

Authors and funding

8 authors.

Akiko ShitaraDivision of Biochemistry, Department of Oral Biology, School of Dentistry, Health Sciences University of Hokkaido, Tobetsu Hokkaido, Ishikari 061-0293, Japan. shitara@hoku-iryo-u.ac.jp
Toru Shibui
Miki Okayama
Toshiya Arakawa
Itaru Mizoguchi
Yasunori Sakakura
Yasunori Shakakura
Taishin Takuma

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Golgi apparatus forms a twisted ribbon-like network in the juxtanuclear region of vertebrate cells. Vesicle-associated membrane protein 4 (VAMP4), a v-SNARE protein expressed exclusively in the vertebrate trans-Golgi network (TGN), plays a role in retrograde trafficking from the early endosome to the TGN, although its precise function within the Golgi apparatus remains unclear. To determine whether VAMP4 plays a functional role in maintaining the structure of the Golgi apparatus, we depleted VAMP4 gene expression using RNA interference technology. Depletion of VAMP4 from HeLa cells led to fragmentation of the Golgi ribbon. These fragments were not uniformly distributed throughout the cytoplasm, but remained in the juxtanuclear area. Electron microscopy and immunohistochemistry showed that in the absence of VAMP4, the length of the Golgi stack was shortened, but Golgi stacking was normal. Anterograde trafficking was not impaired in VAMP4-depleted cells, which contained intact microtubule arrays. Depletion of the cognate SNARE partners of VAMP4, syntaxin 6, syntaxin 16, and Vti1a also disrupted the Golgi ribbon structure. Our findings suggested that the maintenance of Golgi ribbon structure requires normal retrograde trafficking from the early endosome to the TGN, which is likely to be mediated by the formation of VAMP4-containing SNARE complexes.

Indexed as

Blotting, WesternCytoplasmEndosomesGolgi ApparatusGreen Fluorescent ProteinsHeLa CellsHumansImmunohistochemistryMicroscopy, Electron, TransmissionMicroscopy, FluorescenceMicrotubulesN-AcetylgalactosaminyltransferasesPolypeptide N-acetylgalactosaminyltransferaseProtein TransportQa-SNARE ProteinsQb-SNARE ProteinsGreen Fluorescent ProteinsN-AcetylgalactosaminyltransferasesPolypeptide N-acetylgalactosaminyltransferaseQa-SNARE ProteinsQb-SNARE ProteinsR-SNARE ProteinsSyntaxin 16VAMP4 protein, humanVTI1A protein, human

Identifiers

PMID23677696
PMCPMC3695666

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.