Evidence map›Paper›PMID 23675499›Full record

ArticlePloS one2013

Engineering Pseudomonas protegens Pf-5 for nitrogen fixation and its application to improve plant growth under nitrogen-deficient conditions.

Lorena Setten, Gabriela Soto, Matteo Mozzicafreddo, Ana Romina Fox, Christian Lisi, Massimiliano Cuccioloni, Mauro Angeletti, Elba Pagano, Antonio Díaz-Paleo, Nicolás Daniel Ayub

Expression of concernErratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It carries an expression of concern. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
6.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 99 citations in OpenAlex.

  1. Review
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  17. Genetic Determinants of Ammonium Excretion inApplied and environmental microbiology · 2022
    Article
  18. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Lorena SettenInstituto de Genética Ewald A. Favret-CICVyA-INTA, Castelar, Buenos Aires, Argentina.
Gabriela Soto
Matteo Mozzicafreddo
Ana Romina Fox
Christian Lisi
Massimiliano Cuccioloni
Mauro Angeletti
Elba Pagano
Antonio Díaz-Paleo
Nicolás Daniel Ayub
Instituto de Genética Veterinaria · ARConsejo Nacional de Investigaciones Científicas y Técnicas · ARUniversità di Camerino · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrogen is the second most critical factor for crop production after water. In this study, the beneficial rhizobacterium Pseudomonas protegens Pf-5 was genetically modified to fix nitrogen using the genes encoding the nitrogenase of Pseudomonas stutzeri A1501 via the X940 cosmid. Pf-5 X940 was able to grow in L medium without nitrogen, displayed high nitrogenase activity and released significant quantities of ammonium to the medium. Pf-5 X940 also showed constitutive expression and enzymatic activity of nitrogenase in ammonium medium or in nitrogen-free medium, suggesting a constitutive nitrogen fixation. Similar to Pseudomonas protegens Pf-5, Pseudomonas putida, Pseudomonas veronii and Pseudomonas taetrolens but not Pseudomonas balearica and Pseudomonas stutzeri transformed with cosmid X940 showed constitutive nitrogenase activity and high ammonium production, suggesting that this phenotype depends on the genome context and that this technology to obtain nitrogen-fixing bacteria is not restricted to Pf-5. Interestingly, inoculation of Arabidopsis, alfalfa, tall fescue and maize with Pf-5 X940 increased the ammonium concentration in soil and plant productivity under nitrogen-deficient conditions. In conclusion, these results open the way to the production of effective recombinant inoculants for nitrogen fixation on a wide range of crops.

Indexed as

Genome, BacterialSoil MicrobiologyArabidopsisBacterial ProteinsGenetic VectorsMedicago sativaNitrogenNitrogenaseNitrogen FixationPseudomonasPseudomonas putidaPseudomonas stutzeriTransformation, BacterialZea maysBacterial ProteinsNitrogenNitrogenase

Identifiers

PMID23675499
PMCPMC3652814
OpenAlexW1992640753

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.