Evidence map›Paper›PMID 23674686›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Role of a polymorphism in a Hox/Pax-responsive enhancer in the evolution of the vertebrate spine.

Isabel Guerreiro, Andreia Nunes, Joost M Woltering, Ana Casaca, Ana Nóvoa, Tânia Vinagre, Margaret E Hunter, Denis Duboule, Moisés Mallo

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 92 citations in OpenAlex.

  1. Homeotic and nonhomeotic patterns in the tetrapod vertebral formula.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
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  8. Seeking Sense in the Hox Gene Cluster.Journal of developmental biology · 2022
    Review
  9. Article
  10. Article
  11. Article
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  14. Making and shaping endochondral and intramembranous bones.Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Review
  15. The vertebrate tail: a gene playground for evolution.Cellular and molecular life sciences : CMLS · 2020
    Review
  16. Article
  17. Article
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  19. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 4 countries.

Isabel GuerreiroInstituto Gulbenkian de Ciência, 2780-156 Oeiras, Portugal.
Andreia Nunes
Joost M Woltering
Ana Casaca
Ana Nóvoa
Tânia Vinagre
Margaret E Hunter
Denis Duboule
Moisés Mallo
Instituto Gulbenkian de Ciência · PTUniversity of Geneva · CHUnited States Geological Survey · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Patterning of the vertebrate skeleton requires the coordinated activity of Hox genes. In particular, Hox10 proteins are essential to set the transition from thoracic to lumbar vertebrae because of their rib-repressing activity. In snakes, however, the thoracic region extends well into Hox10-expressing areas of the embryo, suggesting that these proteins are unable to block rib formation. Here, we show that this is not a result of the loss of rib-repressing properties by the snake proteins, but rather to a single base pair change in a Hox/Paired box (Pax)-responsive enhancer, which prevents the binding of Hox proteins. This polymorphism is also found in Paenungulata, such as elephants and manatees, which have extended rib cages. In vivo, this modified enhancer failed to respond to Hox10 activity, supporting its role in the extension of rib cages. In contrast, the enhancer could still interact with Hoxb6 and Pax3 to promote rib formation. These results suggest that a polymorphism in the Hox/Pax-responsive enhancer may have played a role in the evolution of the vertebrate spine by differently modulating its response to rib-suppressing and rib-promoting Hox proteins.

Indexed as

Genes, HomeoboxAnimalsBase SequenceBody PatterningColubridaeConserved SequenceEnhancer Elements, GeneticEvolution, MolecularHomeobox A10 ProteinsHomeodomain ProteinsMiceMice, TransgenicMolecular Sequence DataMyogenic Regulatory Factor 5Paired Box Transcription FactorsPolymorphism, Single NucleotideHomeobox A10 ProteinsHomeodomain ProteinsHoxa10 protein, mouseMyogenic Regulatory Factor 5Paired Box Transcription Factorsaxial skeletongene regulationvertebrate patterning

Identifiers

PMID23674686
PMCPMC3696775
OpenAlexW2041866520

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.