Evidence map›Paper›PMID 23674478›Full record

ArticleHuman mutation2013

Mutations in extracellular matrix genes NID1 and LAMC1 cause autosomal dominant Dandy-Walker malformation and occipital cephaloceles.

Benjamin W Darbro, Vinit B Mahajan, Lokesh Gakhar, Jessica M Skeie, Elizabeth Campbell, Shu Wu, Xinyu Bing, Kathleen J Millen, William B Dobyns, John A Kessler and 16 more

Open access · greenAbstract read
In one paragraph

Article in Human mutation, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
8.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Review
  7. Article
  8. Nidogen in development and disease.Frontiers in cell and developmental biology · 2024
    Review
  9. Article
  10. RecessiveFrontiers in molecular neuroscience · 2022
    Article
  11. Review
  12. Diagnostic Approach to Cerebellar Hypoplasia.Cerebellum (London, England) · 2021
    Review
  13. Article
  14. Developmental biology of the meninges.Genesis (New York, N.Y. : 2000) · 2019
    Review
  15. Article
  16. Article
  17. The genetics of cerebellar malformations.Seminars in fetal & neonatal medicine · 2016
    Review
  18. De novo mutations in KIF1A cause progressive encephalopathy and brain atrophy.Annals of clinical and translational neurology · 2015
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 5 institutions in 4 countries.

Benjamin W DarbroDepartment of Pediatrics, The University of Iowa, Iowa City, Iowa52242, USA.
Vinit B Mahajan
Lokesh Gakhar
Jessica M Skeie
Elizabeth Campbell
Shu Wu
Xinyu Bing
Kathleen J Millen
William B Dobyns
John A Kessler
Ali Jalali
James Cremer
Alberto Segre
J Robert Manak
Kimerbly A Aldinger
Satoshi Suzuki
Nagato Natsume
Maya Ono
Huynh Dai Hai
Le Thi Viet
Sara Loddo
Enza M Valente
Laura Bernardini
Nitin Ghonge
Polly J Ferguson
Alexander G Bassuk
University of Iowa · USAichi Gakuin University · JPIstituti di Ricovero e Cura a Carattere Scientifico · ITDr. Agarwal's Eye Hospital · INUniversity of Salerno · IT

Funding

REGULATION OF NEUROTRANSMITTER METABOLISMR01NS020778 · NINDS · YESHIVA UNIVERSITY · PI KESSLER, JOHN A · 1985 to 2014
$4.6M
MECHANISMS GOVERNING NEURONAL DEVELOPMENTR01NS020013 · NINDS · YESHIVA UNIVERSITY · PI KESSLER, JOHN A · 1985 to 2013
$4.1M
Evaluating PRICKLE Mutations in Human Epilepsy and in Animal ModelsR01NS064159 · NINDS · UNIVERSITY OF IOWA · PI BASSUK, ALEXANDER G · 2009 to 2013
$1.7M
Los Angeles Basin Clinical and Translational Science InstituteKL2RR031991 · NCRR · UNIVERSITY OF SOUTHERN CALIFORNIA · PI BUCHANAN, THOMAS A · 2010 to 2011
$1.6M
Molecular Genetics of Dominant Neovascular Inflammatory VitreoretinopathyK08EY020530 · NEI · UNIVERSITY OF IOWA · PI MAHAJAN, VINIT B · 2011 to 2015
$1.1M
Molecular Mechanisms of SOD3 and Oxidative Stress in Diabetic VitreoretinopathyF32EY022280 · NEI · UNIVERSITY OF IOWA · PI SKEIE, JESSICA MARIE · 2012 to 2014
$143k
NEI NIH HHS F32 EY022280NEI NIH HHS K08 EY020530NINDS NIH HHS NIH 1R01 NS064159-01A1NINDS NIH HHS R01 NS020013NINDS NIH HHS R01 NS020778NINDS NIH HHS R01 NS064159
6 · The paper itself

Abstract

We performed whole-exome sequencing of a family with autosomal dominant Dandy-Walker malformation and occipital cephaloceles and detected a mutation in the extracellular matrix (ECM) protein-encoding gene NID1. In a second family, protein interaction network analysis identified a mutation in LAMC1, which encodes a NID1-binding partner. Structural modeling of the NID1-LAMC1 complex demonstrated that each mutation disrupts the interaction. These findings implicate the ECM in the pathogenesis of Dandy-Walker spectrum disorders.

Indexed as

MutationDandy-Walker SyndromeEncephaloceleExomeExtracellular MatrixHumansLamininMembrane GlycoproteinsProtein Structure, TertiarySequence Analysis, DNALamininlaminin gamma 1Membrane GlycoproteinsnidogenDandy-Walkerexomeextracellular matrixLAMC1NID1

Identifiers

PMID23674478
PMCPMC3714376
OpenAlexW2024422974

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.