Evidence map›Paper›PMID 23673728›Full record

ArticlePhysiological genomics2013

Genetic architecture of Wistar-Kyoto rat and spontaneously hypertensive rat substrains from different sources.

Yanli Zhang-James, Frank A Middleton, Stephen V Faraone

Open access · greenAbstract read
In one paragraph

Article in Physiological genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.5field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  4. Article
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  6. Review
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  9. Hypothalamic Corticotropin-Releasing Hormone Contributes to Hypertension in Spontaneously Hypertensive Rats.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Animal Models of ADHD?Current topics in behavioral neurosciences · 2022
    Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Experimental Rodent Models of Cardiovascular Diseases.Frontiers in cardiovascular medicine · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Yanli Zhang-JamesDepartment of Psychiatry, State University of New York Upstate Medical University, Syracuse, New York, USA.
Frank A Middleton
Stephen V Faraone
SUNY Upstate Medical University · US

Funding

Searching for ADHD Susceptibility GenesR01MH066877 · NIMH · UPSTATE MEDICAL UNIVERSITY · PI FARAONE, STEPHEN V · 2002 to 2010
$3.0M
NIMH NIH HHS R01MH-066877
6 · The paper itself

Abstract

The spontaneously hypertensive rat (SHR) has been widely used as a model for studies of hypertension and attention deficit/hyperactivity disorder. The inbred Wistar-Kyoto (WKY) rat, derived from the same ancestral outbred Wistar rat as the SHR, are normotensive and have been used as the closest genetic control for the SHR, although the WKY has also been used as a model for depression. Notably, however, substantial behavioral and genetic differences among the WKY substrains, usually from the different vendors and breeders, have been observed. These differences have often been overlooked in prior studies, leading to inconsistent and even contradictory findings. The complicated breeding history of the SHR and WKY rats and the lack of a comprehensive understanding of the genetic background of different commercial substrains make the selection of control rats a daunting task, even for researchers who are mindful of their genetic heterogeneity. In this study, we examined the genetic relationship of 16 commonly used WKY and SHR rat substrains using genome-wide SNP genotyping data. Our results confirmed a large genetic divergence and complex relationships among the SHR and WKY substrains. This understanding, although incomplete without the genome sequence, provides useful guidance in selecting substrains and helps to interpret previous reports when the source of the animals was known. Moreover, we found two closely related, yet distinct WKY substrains that may provide novel opportunities in modeling psychiatric disorders.

Indexed as

GenomicsAnimalsCluster AnalysisElectrophoresis, Agar GelExonsFactor Analysis, StatisticalGenetic Association StudiesGenetic VariationGenomeGenotypeMalePhenotypePolymorphism, Single NucleotideRatsRats, Inbred SHRRats, Inbred WKYADHDanimal modelsautismbehaviorinbred ratSHRSNPWKY

Identifiers

PMID23673728
PMCPMC3727021
OpenAlexW2052413115

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.