Evidence map›Paper›PMID 23673380›Full record

ArticleScientific reports2013

Metagenomic sequencing reveals microbiota and its functional potential associated with periodontal disease.

Jinfeng Wang, Ji Qi, Hui Zhao, Shu He, Yifei Zhang, Shicheng Wei, Fangqing Zhao

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in Scientific reports, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04830969 (Impact of Periodontal Therapy on Patients With Diabetes), which is not on this map. Cited by 132 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
132citing papers in PubMed, 3 pooled it
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04830969 phase2completednot on this mapstarted 2016, after this paper: background citation

Impact of Periodontal Therapy on Patients With Diabetes: A Pilot Study

TypeinterventionalSponsorState University of New York at BuffaloRan2016 to 2021Enrolled116ConditionsDiabetes Mellitus, Type II, PeriodontitisArmsChlorhexidine gluconate oral rinse, Scaling & Root Planing, Soft Picks
3 · Its place in the literature

Who cites it

132 citing papers in PubMed, 3 syntheses or guidelines pooled it, 242 citations in OpenAlex.

  1. Pooled it
  2. Definitions used for a healthy periodontium-A systematic review.International journal of dental hygiene · 2020
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72 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jinfeng WangBeijing Institutes of Life Science, Chinese Academy of Sciences, Beijing 100101, China.
Ji Qi
Hui Zhao
Shu He
Yifei Zhang
Shicheng Wei
Fangqing Zhao
Chinese Academy of Sciences · CNPeking University · CNFudan University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Although attempts have been made to reveal the relationships between bacteria and human health, little is known about the species and function of the microbial community associated with oral diseases. In this study, we report the sequencing of 16 metagenomic samples collected from dental swabs and plaques representing four periodontal states. Insights into the microbial community structure and the metabolic variation associated with periodontal health and disease were obtained. We observed a strong correlation between community structure and disease status, and described a core disease-associated community. A number of functional genes and metabolic pathways including bacterial chemotaxis and glycan biosynthesis were over-represented in the microbiomes of periodontal disease. A significant amount of novel species and genes were identified in the metagenomic assemblies. Our study enriches the understanding of the oral microbiome and sheds light on the contribution of microorganisms to the formation and succession of dental plaques and oral diseases.

Indexed as

MetagenomicsAdultAgedBiomarkersDental PlaqueFemaleGastrointestinal TractHigh-Throughput Nucleotide SequencingHumansMetagenomeMiddle AgedPeriodontal DiseasesRNA, BacterialRNA, Ribosomal, 16SBiomarkersRNA, BacterialRNA, Ribosomal, 16S

Identifiers

PMID23673380
PMCPMC3654486
OpenAlexW2055921002

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.