ArticleInternational journal of genomics2013
Conservation, Divergence, and Genome-Wide Distribution of PAL and POX A Gene Families in Plants.
Article in International journal of genomics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
28 citing papers in PubMed, 42 citations in OpenAlex.
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- Genome-wide analysis of theFrontiers in plant science · 2026Article
- Phenylalanine Ammonia-Lyase as a Key Enzyme in Tea Plant Resistance to Herbivory.International journal of molecular sciences · 2025Article
- Genome-Wide Identification and Hormone-Induced Expression Analysis of the Anthocyanidin Reductase Gene Family in Sainfoin (International journal of molecular sciences · 2025Article
- Genome-wide identification, transcriptome dynamics, and expression regulation of the key lignin biosynthesis gene families PAL and CAD in black walnut shell.BMC plant biology · 2025Article
- Evolution of phenylalanine ammonia-lyase protein family from algae to angiosperm.Functional & integrative genomics · 2025Article
- A high temperature responsive UDP-glucosyltransferase gene OsUGT72F1 enhances heat tolerance in rice and Arabidopsis.Plant cell reports · 2025Article
- Investigation of the association between gene expression levels and phenolic compound content in the leaves ofHeliyon · 2024Article
- Biosynthesis of Phenolic Compounds ofInternational journal of molecular sciences · 2024Article
- Comprehensive, Genome-Wide Identification and Expression Analyses of Phenylalanine Ammonia-Lyase Family under Abiotic Stresses inInternational journal of molecular sciences · 2024Article
- Article
- Expression profiling of the phenylalanine ammonia-lyase (Plant signaling & behavior · 2023Article
- Genome-wide identification and expression analysis of phenylalanine ammonia-lyase (PAL) family in rapeseed (Brassica napus L.).BMC plant biology · 2023Article
- Phylogenomic analysis of phenylalanine ammonia-lyase (PAL) multigene family and their differential expression analysis in wheat (Frontiers in plant science · 2022Article
- MoSDT1 triggers defense response through modulating phosphorylated proteins in rice.Plant molecular biology · 2022Article
- Genome-Wide Analysis of Four Pathotypes of Wheat Rust Pathogen (Journal of fungi (Basel, Switzerland) · 2021Article
- Deposition of lignin in four species of Saccharum.Scientific reports · 2019Article
- Article
- GmBTB/POZ, a novel BTB/POZ domain-containing nuclear protein, positively regulates the response of soybean to Phytophthora sojae infection.Molecular plant pathology · 2019Article
Corrections and comments
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Authors and funding
3 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Genome-wide identification and phylogenetic and syntenic comparison were performed for the genes responsible for phenylalanine ammonia lyase (PAL) and peroxidase A (POX A) enzymes in nine plant species representing very diverse groups like legumes (Glycine max and Medicago truncatula), fruits (Vitis vinifera), cereals (Sorghum bicolor, Zea mays, and Oryza sativa), trees (Populus trichocarpa), and model dicot (Arabidopsis thaliana) and monocot (Brachypodium distachyon) species. A total of 87 and 1045 genes in PAL and POX A gene families, respectively, have been identified in these species. The phylogenetic and syntenic comparison along with motif distributions shows a high degree of conservation of PAL genes, suggesting that these genes may predate monocot/eudicot divergence. The POX A family genes, present in clusters at the subtelomeric regions of chromosomes, might be evolving and expanding with higher rate than the PAL gene family. Our analysis showed that during the expansion of POX A gene family, many groups and subgroups have evolved, resulting in a high level of functional divergence among monocots and dicots. These results will act as a first step toward the understanding of monocot/eudicot evolution and functional characterization of these gene families in the future.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.