Evidence map›Paper›PMID 23669718›Full record

ArticleThe Journal of general physiology2013

Channel properties of the splicing isoforms of the olfactory calcium-activated chloride channel Anoctamin 2.

Samsudeen Ponissery Saidu, Aaron B Stephan, Anna K Talaga, Haiqing Zhao, Johannes Reisert

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of general physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
  2. The CaThe Journal of physiology · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Polymodal Control of TMEM16x Channels and Scramblases.International journal of molecular sciences · 2022
    Review
  7. Article
  8. Article
  9. Review
  10. Review
  11. CaThe Journal of biological chemistry · 2018
    Article
  12. CaProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  13. The long tale of the calcium activated ClChannels (Austin, Tex.) · 2017
    Review
  14. Article
  15. Article
  16. Cyclic-nucleotide-gated cation current and Ca2+-activated Cl current elicited by odorant in vertebrate olfactory receptor neurons.Proceedings of the National Academy of Sciences of the United States of America · 2016
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Samsudeen Ponissery SaiduMonell Chemical Senses Center, Philadelphia, PA 19104, USA.
Aaron B Stephan
Anna K Talaga
Haiqing Zhao
Johannes Reisert
Johns Hopkins University · USMonell Chemical Senses Center · US

Funding

Regulation of Olfactory Signal TransductionR01DC007395 · NIDCD · JOHNS HOPKINS UNIVERSITY · PI ZHAO, HAIQING · 2008 to 2016
$3.5M
Dynamic Aspects of Olfactory Signal TransductionR01DC009613 · NIDCD · MONELL CHEMICAL SENSES CENTER · PI REISERT, JOHANNES · 2010 to 2014
$1.5M
NIDCD NIH HHS DC007395NIDCD NIH HHS DC009613NIDCD NIH HHS R01 DC007395NIDCD NIH HHS R01 DC009613
6 · The paper itself

Abstract

Anoctamin (ANO)2 (or TMEM16B) forms a cell membrane Ca(2+)-activated Cl(-) channel that is present in cilia of olfactory receptor neurons, vomeronasal microvilli, and photoreceptor synaptic terminals. Alternative splicing of Ano2 transcripts generates multiple variants with the olfactory variants skipping exon 14 and having alternative splicing of exon 4. In the present study, 5' rapid amplification of cDNA ends analysis was conducted to characterize the 5' end of olfactory Ano2 transcripts, which showed that the most abundant Ano2 transcripts in the olfactory epithelium contain a novel starting exon that encodes a translation initiation site, whereas transcripts of the publically available sequence variant, which has an alternative and longer 5' end, were present in lower abundance. With two alternative starting exons and alternative splicing of exon 4, four olfactory ANO2 isoforms are thus possible. Patch-clamp experiments in transfected HEK293T cells expressing these isoforms showed that N-terminal sequences affect Ca(2+) sensitivity and that the exon 4-encoded sequence is required to form functional channels. Coexpression of the two predominant isoforms, one with and one without the exon 4 sequence, as well as coexpression of the two rarer isoforms showed alterations in channel properties, indicating that different isoforms interact with each other. Furthermore, channel properties observed from the coexpression of the predominant isoforms better recapitulated the native channel properties, suggesting that the native channel may be composed of two or more splicing isoforms acting as subunits that together shape the channel properties.

Indexed as

Action PotentialsAlternative SplicingProtein Multimerization5' Untranslated RegionsAmino Acid SequenceAnimalsAnoctaminsCalciumChloride ChannelsExonsHEK293 CellsHumansMiceMice, Inbred C57BLMolecular Sequence DataProtein Binding5' Untranslated RegionsANO2 protein, mouseAnoctaminsCalciumChloride ChannelsProtein IsoformsProtein SubunitsRNA, Messenger

Identifiers

PMID23669718
PMCPMC3664704
OpenAlexW2146233741

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.