Evidence map›Paper›PMID 23667620›Full record

ArticlePloS one2013

Effect of signal peptide on stability and folding of Escherichia coli thioredoxin.

Pranveer Singh, Likhesh Sharma, S Rajendra Kulothungan, Bharat V Adkar, Ravindra Singh Prajapati, P Shaik Syed Ali, Beena Krishnan, Raghavan Varadarajan

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 41 papers.

0numbers the graph read from it
0cells of the map it votes in
41citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

41 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
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  6. Review
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  10. Foam fractionation studies of recombinant human apolipoprotein A-I.Biochimica et biophysica acta. Biomembranes · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Signal peptide stabilizes folding and inhibits misfolding of serum amyloid A.Protein science : a publication of the Protein Society · 2022
    Article
  15. Article
  16. Article
  17. Article
  18. Co-Translational Folding of Multi-Domain Proteins.Frontiers in molecular biosciences · 2022
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Pranveer SinghMolecular Biophysics Unit, Indian Institute of Science, Bangalore, India.
Likhesh Sharma
S Rajendra Kulothungan
Bharat V Adkar
Ravindra Singh Prajapati
P Shaik Syed Ali
Beena Krishnan
Raghavan Varadarajan
Indian Institute of Science Bangalore · INJawaharlal Nehru Centre for Advanced Scientific Research · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The signal peptide plays a key role in targeting and membrane insertion of secretory and membrane proteins in both prokaryotes and eukaryotes. In E. coli, recombinant proteins can be targeted to the periplasmic space by fusing naturally occurring signal sequences to their N-terminus. The model protein thioredoxin was fused at its N-terminus with malE and pelB signal sequences. While WT and the pelB fusion are soluble when expressed, the malE fusion was targeted to inclusion bodies and was refolded in vitro to yield a monomeric product with identical secondary structure to WT thioredoxin. The purified recombinant proteins were studied with respect to their thermodynamic stability, aggregation propensity and activity, and compared with wild type thioredoxin, without a signal sequence. The presence of signal sequences leads to thermodynamic destabilization, reduces the activity and increases the aggregation propensity, with malE having much larger effects than pelB. These studies show that besides acting as address labels, signal sequences can modulate protein stability and aggregation in a sequence dependent manner.

Indexed as

Protein FoldingProtein Sorting SignalsAmino Acid SequenceAnilino NaphthalenesulfonatesBuffersCalorimetry, Differential ScanningChromatography, GelCircular DichroismElectrophoresis, Polyacrylamide GelEscherichia coliGuanidineInsulinMolecular Sequence DataProtein DenaturationProtein RefoldingProtein Stability1-anilino-8-naphthalenesulfonateAnilino NaphthalenesulfonatesBuffersGuanidineInsulinProtein Sorting SignalsRecombinant Fusion ProteinsThioredoxins

Identifiers

PMID23667620
PMCPMC3646739
OpenAlexW2088972187

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.