Evidence map›Paper›PMID 23667232›Full record

ArticleJournal of bacteriology2013

Mutational analysis of hemoglobin binding and heme utilization by a bacterial hemoglobin receptor.

W G Fusco, N R Choudhary, S E Council, E J Collins, I Leduc

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Cross-Kingdom Pathogenesis ofMicroorganisms · 2024
    Article
  2. Article
  3. Article
  4. Article
  5. Heme uptake in bacterial pathogens.Current opinion in chemical biology · 2014
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

W G FuscoDepartments of Medicine.
N R Choudhary
S E Council
E J Collins
I Leduc
University of North Carolina at Chapel Hill · US

Funding

Heme Scavenging and Uptake by Haemophilus ducreyiR21AI088081 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI COLLINS, EDWARD JOHN · 2010 to 2011
$405k
NIAID NIH HHS AI088081NIAID NIH HHS R21 AI088081
6 · The paper itself

Abstract

Iron is an essential nutrient for most living organisms. To acquire iron from their environment, Gram-negative bacteria use TonB-dependent transporters that bind host proteins at the bacterial surface and transport iron or heme to the periplasm via the Ton machinery. TonB-dependent transporters are barrel-shaped outer membrane proteins with 22 transmembrane domains, 11 surface-exposed loops, and a plug domain that occludes the pore. To identify key residues of TonB-dependent transporters involved in hemoglobin binding and heme transport and thereby locate putative protective epitopes, the hemoglobin receptor of Haemophilus ducreyi HgbA was used as a model of iron/heme acquisition from hemoglobin. Although all extracellular loops of HgbA are required by H. ducreyi to use hemoglobin as a source of iron/heme, we previously demonstrated that hemoglobin binding by HgbA only involves loops 5 and 7. Using deletion, substitution, and site-directed mutagenesis, we were able to differentiate hemoglobin binding and heme acquisition by HgbA. Deletion or substitution of the GYEAYNRQWWA region of loop 5 and alanine replacement of selected histidines affected hemoglobin binding by HgbA. Conversely, mutation of the phenylalanine in the loop 7 FRAP domain or substitution of the NRQWWA motif of loop 5 significantly abrogated utilization of heme from hemoglobin. Our findings show that hemoglobin binding and heme utilization by a bacterial hemoglobin receptor involve specific motifs of HgbA.

Indexed as

Bacterial Outer Membrane ProteinsHaemophilus ducreyiHemeHemoglobinsMutagenesis, Site-DirectedProtein BindingProtein Structure, SecondaryProtein Structure, TertiarySequence Homology, Amino AcidBacterial Outer Membrane ProteinsHemeHemoglobins

Identifiers

PMID23667232
PMCPMC3697543
OpenAlexW2146108913

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.