Evidence map›Paper›PMID 23667126›Full record

ArticleThe Plant cell2013

The α/β hydrolase CGI-58 and peroxisomal transport protein PXA1 coregulate lipid homeostasis and signaling in Arabidopsis.

Sunjung Park, Satinder K Gidda, Christopher N James, Patrick J Horn, Nicholas Khuu, Damien C Seay, Jantana Keereetaweep, Kent D Chapman, Robert T Mullen, John M Dyer

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed, 1 pooled it
5.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 1 synthesis or guideline pooled it, 90 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Molecular Machinery of Lipid Droplet Degradation and Turnover in Plants.International journal of molecular sciences · 2023
    Review
  10. Rice lipases: a conundrum in rice bran stabilization: a review on their impact and biotechnological interventions.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  11. Review
  12. Article
  13. Review
  14. Review
  15. Exploring the Contribution of Autophagy to the Excess-Sucrose Response inInternational journal of molecular sciences · 2022
    Article
  16. Overexpression of Peroxisome-LocalizedInternational journal of molecular sciences · 2022
    Article
  17. Frontiers in plant science · 2021
    Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Sunjung ParkU.S. Department of Agriculture-Agricultural Research Service, U.S. Arid-Land Agricultural Research Center, Maricopa, Arizona 85138, USA.
Satinder K Gidda
Christopher N James
Patrick J Horn
Nicholas Khuu
Damien C Seay
Jantana Keereetaweep
Kent D Chapman
Robert T Mullen
John M Dyer
University of North Texas · USUniversity of Guelph · CAAgricultural Research Service · USU.S. Arid Land Agricultural Research Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

COMPARATIVE GENE IDENTIFICATION-58 (CGI-58) is a key regulator of lipid metabolism and signaling in mammals, but its underlying mechanisms are unclear. Disruption of CGI-58 in either mammals or plants results in a significant increase in triacylglycerol (TAG), suggesting that CGI-58 activity is evolutionarily conserved. However, plants lack proteins that are important for CGI-58 activity in mammals. Here, we demonstrate that CGI-58 functions by interacting with the PEROXISOMAL ABC-TRANSPORTER1 (PXA1), a protein that transports a variety of substrates into peroxisomes for their subsequent metabolism by β-oxidation, including fatty acids and lipophilic hormone precursors of the jasmonate and auxin biosynthetic pathways. We also show that mutant cgi-58 plants display changes in jasmonate biosynthesis, auxin signaling, and lipid metabolism consistent with reduced PXA1 activity in planta and that, based on the double mutant cgi-58 pxa1, PXA1 is epistatic to CGI-58 in all of these processes. However, CGI-58 was not required for the PXA1-dependent breakdown of TAG in germinated seeds. Collectively, the results reveal that CGI-58 positively regulates many aspects of PXA1 activity in plants and that these two proteins function to coregulate lipid metabolism and signaling, particularly in nonseed vegetative tissues. Similarities and differences of CGI-58 activity in plants versus animals are discussed.

Indexed as

Lipid MetabolismAcyltransferasesAdenosine TriphosphatasesAmino Acid SequenceArabidopsisArabidopsis ProteinsATP-Binding Cassette TransportersCell NucleusCyclopentanesFatty AcidsFatty Acid Transport ProteinsHomeostasisHydrolasesIndoleacetic AcidsLuminescent ProteinsMicroscopy, Confocal2-acylglycerophosphate acyltransferaseAcyltransferasesAdenosine TriphosphatasesArabidopsis ProteinsAt4g39850 protein, ArabidopsisATP-Binding Cassette TransportersCyclopentanesFatty AcidsFatty Acid Transport ProteinsHydrolasesIndoleacetic Acidsjasmonic acidLuminescent ProteinsOxylipinsPlant Growth RegulatorsTriglycerides

Identifiers

PMID23667126
PMCPMC3694702
OpenAlexW2139061681

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.