Evidence map›Paper›PMID 23666887›Full record

ArticleAnnals of botany2013

Determinate primary root growth as an adaptation to aridity in Cactaceae: towards an understanding of the evolution and genetic control of the trait.

Svetlana Shishkova, María Laura Las Peñas, Selene Napsucialy-Mendivil, Marta Matvienko, Alex Kozik, Jesús Montiel, Anallely Patiño, Joseph G Dubrovsky

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Article in Annals of botany, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 31 citations in OpenAlex.

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  13. Article
  14. Root Growth Adaptation to Climate Change in Crops.Frontiers in plant science · 2020
    Review
  15. Article
  16. Article
  17. Matching roots to their environment.Annals of botany · 2013
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Svetlana ShishkovaDepartamento de Biología Molecular de Plantas, Instituto de Biotecnología, Universidad Nacional Autónoma de México, Cuernavaca, Morelos, Mexico. sveta@ibt.unam.mx
María Laura Las Peñas
Selene Napsucialy-Mendivil
Marta Matvienko
Alex Kozik
Jesús Montiel
Anallely Patiño
Joseph G Dubrovsky
Universidad Nacional Autónoma de México · MXConsejo Nacional de Investigaciones Científicas y Técnicas · ARRogers (United States) · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

aimsSpecies of Cactaceae are well adapted to arid habitats. Determinate growth of the primary root, which involves early and complete root apical meristem (RAM) exhaustion and differentiation of cells at the root tip, has been reported for some Cactoideae species as a root adaptation to aridity. In this study, the primary root growth patterns of Cactaceae taxa from diverse habitats are classified as being determinate or indeterminate, and the molecular mechanisms underlying RAM maintenance in Cactaceae are explored. Genes that were induced in the primary root of Stenocereus gummosus before RAM exhaustion are identified.

methodsPrimary root growth was analysed in Cactaceae seedlings cultivated in vertically oriented Petri dishes. Differentially expressed transcripts were identified after reverse northern blots of clones from a suppression subtractive hybridization cDNA library. KEY

resultsAll species analysed from six tribes of the Cactoideae subfamily that inhabit arid and semi-arid regions exhibited determinate primary root growth. However, species from the Hylocereeae tribe, which inhabit mesic regions, exhibited mostly indeterminate primary root growth. Preliminary results suggest that seedlings of members of the Opuntioideae subfamily have mostly determinate primary root growth, whereas those of the Maihuenioideae and Pereskioideae subfamilies have mostly indeterminate primary root growth. Seven selected transcripts encoding homologues of heat stress transcription factor B4, histone deacetylase, fibrillarin, phosphoethanolamine methyltransferase, cytochrome P450 and gibberellin-regulated protein were upregulated in S. gummosus root tips during the initial growth phase.

conclusionsPrimary root growth in Cactoideae species matches their environment. The data imply that determinate growth of the primary root became fixed after separation of the Cactiodeae/Opuntioideae and Maihuenioideae/Pereskioideae lineages, and that the genetic regulation of RAM maintenance and its loss in Cactaceae is orchestrated by genes involved in the regulation of gene expression, signalling, and redox and hormonal responses.

Indexed as

Adaptation, PhysiologicalBiological EvolutionCactaceaeCell DifferentiationDNA, ComplementaryEcosystemGene Expression Regulation, PlantGene LibraryMeristemOxidation-ReductionPhenotypePhylogenyPlant Growth RegulatorsPlant ProteinsPlant RootsRNA, PlantDNA, ComplementaryPlant Growth RegulatorsPlant ProteinsRNA, Plantadaptation to aridityCactaceaeCactoideaedeterminate growth of primary rootdifferential gene expressionMaihuenioideaeOpuntioideaePereskioideaeRoot development

Identifiers

PMID23666887
PMCPMC3698391
OpenAlexW2137767446

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.