Evidence map›Paper›PMID 23666210›Full record

ArticleMolecular biology and evolution2013

Genetic signatures reveal high-altitude adaptation in a set of ethiopian populations.

Emilia Huerta-Sánchez, Michael Degiorgio, Luca Pagani, Ayele Tarekegn, Rosemary Ekong, Tiago Antao, Alexia Cardona, Hugh E Montgomery, Gianpiero L Cavalleri, Peter A Robbins and 6 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular biology and evolution, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 125 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
125citing papers in PubMed, 1 pooled it
14.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

125 citing papers in PubMed, 1 synthesis or guideline pooled it, 230 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Exploring the genetic footprints of high altitude adapted humans and livestock.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
    Review
  7. Review
  8. Advances in Understanding Adaptive Hemoglobin Concentration at High Altitude.American journal of human biology : the official journal of the Human Biology Council · 2025
    Article
  9. Article
  10. Article
  11. Article
  12. Chasing genes at high-altitude.Experimental physiology · 2025
    Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article

65 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 9 institutions in 6 countries.

Emilia Huerta-SánchezDepartment of Integrative Biology, University of California, Berkeley, CA, USA. emiliahsc@berkeley.edu
Michael Degiorgio
Luca Pagani
Ayele Tarekegn
Rosemary Ekong
Tiago Antao
Alexia Cardona
Hugh E Montgomery
Gianpiero L Cavalleri
Peter A Robbins
Michael E Weale
Neil Bradman
Endashaw Bekele
Toomas Kivisild
Chris Tyler-Smith
Rasmus Nielsen
University College London · GBUniversity of Cambridge · GBAddis Ababa University · ETUniversity of California, Berkeley · USWellcome Sanger Institute · GBBGI Group (China) · CNKing's College London · GBRoyal College of Surgeons in Ireland · IEUniversity of Oxford · GB

Funding

Population Genetic Inferences From Dense Genotype DataR01HG003229 · NHGRI · CORNELL UNIVERSITY ITHACA · PI BUSTAMANTE, CARLOS DANIEL, CLARK, ANDREW G · 2004 to 2013
$4.8M
NHGRI NIH HHS R01 HG003229NHGRI NIH HHS R01HG003229NHGRI NIH HHS R01HG003229-08S2
6 · The paper itself

Abstract

The Tibetan and Andean Plateaus and Ethiopian highlands are the largest regions to have long-term high-altitude residents. Such populations are exposed to lower barometric pressures and hence atmospheric partial pressures of oxygen. Such "hypobaric hypoxia" may limit physical functional capacity, reproductive health, and even survival. As such, selection of genetic variants advantageous to hypoxic adaptation is likely to have occurred. Identifying signatures of such selection is likely to help understanding of hypoxic adaptive processes. Here, we seek evidence of such positive selection using five Ethiopian populations, three of which are from high-altitude areas in Ethiopia. As these populations may have been recipients of Eurasian gene flow, we correct for this admixture. Using single-nucleotide polymorphism genotype data from multiple populations, we find the strongest signal of selection in BHLHE41 (also known as DEC2 or SHARP1). Remarkably, a major role of this gene is regulation of the same hypoxia response pathway on which selection has most strikingly been observed in both Tibetan and Andean populations. Because it is also an important player in the circadian rhythm pathway, BHLHE41 might also provide insights into the mechanisms underlying the recognized impacts of hypoxia on the circadian clock. These results support the view that Ethiopian, Andean, and Tibetan populations living at high altitude have adapted to hypoxia differently, with convergent evolution affecting different genes from the same pathway.

Indexed as

AltitudeGenome-Wide Association StudyTranscriptomeAcclimatizationBiological EvolutionEthiopiaGene Regulatory NetworksGenetics, PopulationHumansHypoxiaPolymorphism, Single NucleotideSelection, Geneticadaptation to high altitudenatural selection

Identifiers

PMID23666210
PMCPMC3708501
OpenAlexW2142003314

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.