Evidence map›Paper›PMID 23665963›Full record

ArticleInflammatory bowel diseases2013

Multidimensional prognostic risk assessment identifies association between IL12B variation and surgery in Crohn's disease.

Marla C Dubinsky, Subra Kugathasan, Soonil Kwon, Talin Haritunians, Iwona Wrobel, Ghassan Wahbeh, Antonio Quiros, Ron Bahar, Gary Silber, Sharmayne Farrior and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Inflammatory bowel diseases, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 3 pooled it
4.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 3 syntheses or guidelines pooled it, 43 citations in OpenAlex.

  1. Pooled it
  2. ACG Clinical Guideline: Management of Crohn's Disease in Adults.The American journal of gastroenterology · 2018
    Guideline
  3. Pooled it
  4. Review
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. IBD: Genetic differences in Crohn's disease susceptibility and outcome.Nature reviews. Gastroenterology & hepatology · 2017
    Article
  12. Biomarkers in Search of Precision Medicine in IBD.The American journal of gastroenterology · 2016
    Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Personalized Medicine in Inflammatory Bowel Disease.Gastroenterology & hepatology · 2014
    Article
  19. Genetic studies of Crohn's disease: past, present and future.Best practice & research. Clinical gastroenterology · 2014
    Review
  20. In the pipeline.Gastroenterology & hepatology · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 3 institutions in 2 countries.

Marla C DubinskyDepartments of Pediatrics, Pediatric Inflammatory Bowel Disease Center and Immunobiology Research Institute, Cedars-Sinai Medical Center, Los Angeles, California, USA. dubinskym@csmc.edu
Subra Kugathasan
Soonil Kwon
Talin Haritunians
Iwona Wrobel
Ghassan Wahbeh
Antonio Quiros
Ron Bahar
Gary Silber
Sharmayne Farrior
Michael Stephens
Nick Teleten
Deepa Panikkath
Andrew Ippoliti
Eric Vasiliauskas
Phillip Fleshner
Chadwick Williams
Carol Landers
Jerome I Rotter
Stephan R Targan
Kent D Taylor
Dermot P B McGovern
Cedars-Sinai Medical Center · USEmory University · USMedical College of Wisconsin · US

Funding

Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ALAN R. SALTIEL · 2003 to 2026
$40.4M
Using polygenic scores to enhance both variant discovery, and understanding of functional consequences of genetic variation in IBD.P01DK046763 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI TARGAN, STEPHAN R. · 1992 to 2020
$31.1M
UCLA CLINICAL AND TRANSLATIONAL SCIENCE INSTITUTEUL1RR033176 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI DUBINETT, STEVEN M. · 2011 to 2011
$15.5M
Utilizing the Phenomics of IBD to Enhance Gene DiscoveryU01DK062413 · NIDDK · CEDARS-SINAI MEDICAL CENTER · PI Dermot Patrick McGovern · 2002 to 2026
$12.2M
Clincal and Translational Science AwardUL1TR000055 · NCATS · MEDICAL COLLEGE OF WISCONSIN · PI SHAKER, REZA NONE · 2012 to 2015
$11.3M
NCATS NIH HHS UL1 TR000055NCRR NIH HHS UL1 RR033176NCRR NIH HHS UL1RR033176NIDDK NIH HHS DK062413NIDDK NIH HHS DK063491NIDDK NIH HHS P01 DK046763NIDDK NIH HHS P01-DK046763NIDDK NIH HHS P30 DK063491NIDDK NIH HHS U01 DK062413
6 · The paper itself

Abstract

backgroundThe ability to identify patients with Crohn's disease (CD) at highest risk of surgery would be invaluable in guiding therapy. Genome-wide association studies have identified multiple IBD loci with unknown phenotypic consequences. The aims of this study were to: (1) identify associations between known and novel CD loci with early resective CD surgery and (2) develop the best predictive model for time to surgery using a combination of phenotypic, serologic, and genetic variables.

methodsGenotyping was performed on 1,115 subjects using Illumina-based genome-wide technology. Univariate and multivariate analyses tested genetic associations with need for surgery within 5 years. Analyses were performed by testing known CD loci (n = 71) and by performing a genome-wide association study. Time to surgery was analyzed using Cox regression modeling. Clinical and serologic variables were included along with genotype to build predictive models for time to surgery.

resultsSurgery occurred within 5 years in 239 subjects at a median time of 12 months. Three CD susceptibility loci were independently associated with surgery within 5 years (IL12B, IL23R, and C11orf30). Genome-wide association identified novel putative loci associated with early surgery: 7q21 (CACNA2D1) and 9q34 (RXRA, COL5A1). The most predictive models of time to surgery included genetic and clinical risk factors. More than a 20% difference in frequency of progression to surgery was seen between the lowest and highest risk groups.

conclusionsProgression to surgery is faster in patients with CD with both genetic and clinical risk factors. IL12B is independently associated with need and time to early surgery in CD patients and justifies the investigation of novel and existing therapies that affect this pathway.

Indexed as

Genetic LociAdolescentAdultAgedChildChild, PreschoolChromosome MappingCrohn DiseaseFemaleFollow-Up StudiesGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansInfantInterleukin-12 Subunit p40IL12B protein, humanInterleukin-12 Subunit p40

Identifiers

PMID23665963
PMCPMC3874388
OpenAlexW1981126103

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.