ArticleG3 (Bethesda, Md.)2013
Sequence-based mapping of the polyploid wheat genome.
Article in G3 (Bethesda, Md.), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 71 papers, 1 of them a synthesis that pooled it.
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Who cites it
71 citing papers in PubMed, 1 synthesis or guideline pooled it.
- Meta-Analysis of the QTLome of Fusarium Head Blight Resistance in Bread Wheat: Refining the Current Puzzle.Frontiers in plant science · 2019Pooled it
- Benchmarking long-read variant calling in diploid and polyploid genomes: insights from human and plants.BMC genomics · 2026Article
- MAGIC populations: a next-generation framework for dissecting complex quantitative traits and accelerating molecular breeding in crops.Frontiers in plant science · 2026Review
- Genomic signals of ecogeographic adaptation in a wild relative are associated with improved wheat performance under drought stress.Genome biology · 2025Article
- Meta-QTL mapping for wheat thousand kernel weight.Frontiers in plant science · 2024Article
- Unravelling consensus genomic regions conferring leaf rust resistance in wheat via meta-QTL analysis.The plant genome · 2022Article
- Development of the Wheat Practical Haplotype Graph database as a resource for genotyping data storage and genotype imputation.G3 (Bethesda, Md.) · 2022Article
- Identification of genomic loci conferring broad-spectrum resistance to multiple nematode species in exotic soybean accession PI 567305.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Large-scale integration of meta-QTL and genome-wide association study discovers the genomic regions and candidate genes for yield and yield-related traits in bread wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- Evaluation of genetic structure in European wheat cultivars and advanced breeding lines using high-density genotyping-by-sequencing approach.BMC genomics · 2021Article
- A wheat cysteine-rich receptor-like kinase confers broad-spectrum resistance against Septoria tritici blotch.Nature communications · 2021Article
- Elucidating SNP-based genetic diversity and population structure of advanced breeding lines of bread wheat (PeerJ · 2021Article
- Linkage mapping and QTL analysis of flowering time using ddRAD sequencing with genotype error correction in Brassica napus.BMC plant biology · 2020Article
- Characterization of the leaf rust responsive ARF genes in wheat (Triticum aestivum L.).Plant cell reports · 2020Article
- Genomic Patterns of Introgression in Interspecific Populations Created by Crossing Wheat with Its Wild Relative.G3 (Bethesda, Md.) · 2020Article
- Mapping crown rust resistance at multiple time points in elite oat germplasm.The plant genome · 2020Article
- The improved assembly of 7DL chromosome provides insight into the structure and evolution of bread wheat.Plant biotechnology journal · 2020Article
- Article
- Genetic Diversity and Population Structure of Asian and European Common Wheat Accessions Based on Genotyping-By-Sequencing.Frontiers in genetics · 2020Article
- Application of Genomics Tools in Wheat Breeding to Attain Durable Rust Resistance.Frontiers in plant science · 2020Review
11 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
The emergence of new sequencing technologies has provided fast and cost-efficient strategies for high-resolution mapping of complex genomes. Although these approaches hold great promise to accelerate genome analysis, their application in studying genetic variation in wheat has been hindered by the complexity of its polyploid genome. Here, we applied the next-generation sequencing of a wheat doubled-haploid mapping population for high-resolution gene mapping and tested its utility for ordering shotgun sequence contigs of a flow-sorted wheat chromosome. A bioinformatical pipeline was developed for reliable variant analysis of sequence data generated for polyploid wheat mapping populations. The results of variant mapping were consistent with the results obtained using the wheat 9000 SNP iSelect assay. A reference map of the wheat genome integrating 2740 gene-associated single-nucleotide polymorphisms from the wheat iSelect assay, 1351 diversity array technology, 118 simple sequence repeat/sequence-tagged sites, and 416,856 genotyping-by-sequencing markers was developed. By analyzing the sequenced megabase-size regions of the wheat genome we showed that mapped markers are located within 40-100 kb from genes providing a possibility for high-resolution mapping at the level of a single gene. In our population, gene loci controlling a seed color phenotype cosegregated with 2459 markers including one that was located within the red seed color gene. We demonstrate that the high-density reference map presented here is a useful resource for gene mapping and linking physical and genetic maps of the wheat genome.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.