Evidence map›Paper›PMID 23665564›Full record

ArticleThe Journal of biological chemistry2013

Reinterpreting the action of ATP analogs on K(ATP) channels.

David Ortiz, Lindsay Gossack, Ulrich Quast, Joseph Bryan

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 33 citations in OpenAlex.

  1. A fluorescent probe for the enzymatic activity of KbioRxiv : the preprint server for biology · 2025
    Article
  2. Article
  3. Article
  4. Ion Channels of the Islets in Type 2 Diabetes.Journal of molecular biology · 2020
    Review
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  14. Structural basis for allosteric cross-talk between the asymmetric nucleotide binding sites of a heterodimeric ABC exporter.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  15. Review
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

David OrtizPacific Northwest Diabetes Research Institute, Seattle, Washington 98122, USA.
Lindsay Gossack
Ulrich Quast
Joseph Bryan
Pacific Northwest Diabetes Research Institute · USTH Bingen University of Applied Sciences · DE

Funding

HOUSTON AREA MOLECULAR BIOPHYSICS TRAINING PROGRAMT32GM008280 · NIGMS · RICE UNIVERSITY · PI WENSEL, THEODORE G · 1988 to 2023
$8.0M
Challenging the Dominant Model for ATP Regulation of KATP ChannelsR01DK098647 · NIDDK · PACIFIC NORTHWEST RESEARCH INSTITUTE · PI BRYAN, JOSEPH · 2014 to 2017
$1.4M
NIDDK NIH HHS R01 DK098647NIGMS NIH HHS T32 GM008280
6 · The paper itself

Abstract

Neuroendocrine-type K(ATP) channels, (SUR1/Kir6.2)4, couple the transmembrane flux of K(+), and thus membrane potential, with cellular metabolism in various cell types including insulin-secreting β-cells. Mutant channels with reduced activity are a cause of congenital hyperinsulinism, whereas hyperactive channels are a cause of neonatal diabetes. A current regulatory model proposes that ATP hydrolysis is required to switch SUR1 into post-hydrolytic conformations able to antagonize the inhibitory action of nucleotide binding at the Kir6.2 pore, thus coupling enzymatic and channel activities. Alterations in SUR1 ATPase activity are proposed to contribute to neonatal diabetes and type 2 diabetes risk. The regulatory model is partly based on the reduced ability of ATP analogs such as adenosine 5'-(β,γ-imino)triphosphate (AMP-PNP) and adenosine 5'-O-(thiotriphosphate) (ATPγS) to stimulate channel activity, presumably by reducing hydrolysis. This study uses a substitution at the catalytic glutamate, SUR(1E1507Q), with a significantly increased affinity for ATP, to probe the action of these ATP analogs on conformational switching. ATPγS, a slowly hydrolyzable analog, switches SUR1 conformations, albeit with reduced affinity. Nonhydrolyzable AMP-PNP and adenosine 5'-(β,γ-methylenetriphosphate) (AMP-PCP) alone fail to switch SUR1, but do reverse ATP-induced switching. AMP-PCP displaces 8-azido-[(32)P]ATP from the noncanonical NBD1 of SUR1. This is consistent with structural data on an asymmetric bacterial ABC protein that shows that AMP-PNP binds selectively to the noncanonical NBD to prevent conformational switching. The results imply that MgAMP-PNP and MgAMP-PCP (AMP-PxP) fail to activate K(ATP) channels because they do not support NBD dimerization and conformational switching, rather than by limiting enzymatic activity.

Indexed as

Adenosine TriphosphateAdenylyl ImidodiphosphateAllosteric SiteATP-Binding Cassette TransportersDiabetes MellitusDimerizationDose-Response Relationship, DrugHumansHydrolysisInhibitory Concentration 50Kcnj11 ChannelMutationPichiaPotassium Channels, Inwardly RectifyingProtein BindingProtein Conformation5'-adenylyl (beta,gamma-methylene)diphosphonateABCC8 protein, humanadenosine 5'-O-(3-thiotriphosphate)Adenosine TriphosphateAdenylyl ImidodiphosphateATP-Binding Cassette TransportersKcnj11 ChannelPotassium Channels, Inwardly RectifyingReceptors, DrugSulfonylurea CompoundsSulfonylurea ReceptorsABCC8ABC TransporterAllosteric RegulationATP AnalogsKATP ChannelsLigand-binding ProteinNeonatal DiabetesNucleoside Nucleotide AnalogsPotassium ChannelsSulfonylureas

Identifiers

PMID23665564
PMCPMC3696665
OpenAlexW2087730375

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.