Evidence map›Paper›PMID 23661397›Full record

ArticleJournal of applied genetics2013

Detection of MGMT, RASSF1A, p15INK4B, and p14ARF promoter methylation in circulating tumor-derived DNA of central nervous system cancer patients.

Aleksandra Majchrzak-Celińska, Jarosław Paluszczak, Robert Kleszcz, Marta Magiera, Anna-Maria Barciszewska, Stanisław Nowak, Wanda Baer-Dubowska

Open access · hybridAbstract read
In one paragraph

Article in Journal of applied genetics, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed, 3 pooled it
2.5field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 3 syntheses or guidelines pooled it, 75 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Review
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  7. Review
  8. Article
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  11. Review
  12. Review
  13. Long-read sequencing for brain tumors.Frontiers in oncology · 2024
    Review
  14. Review
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  17. Liquid biopsy and glioblastoma.Exploration of targeted anti-tumor therapy · 2023
    Review
  18. Review
  19. Article
  20. Liquid biopsy-from bench to bedside.Neuro-oncology advances · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Aleksandra Majchrzak-CelińskaDepartment of Pharmaceutical Biochemistry, Poznań University of Medical Sciences, ul. Święcickiego 4, 60-781, Poznań, Poland.
Jarosław Paluszczak
Robert Kleszcz
Marta Magiera
Anna-Maria Barciszewska
Stanisław Nowak
Wanda Baer-Dubowska
Poznan University of Medical Sciences · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the growing understanding of the mechanisms of carcinogenesis, cancers of the central nervous system are usually associated with unfavorable prognosis. The use of an appropriate molecular marker may improve the treatment outcome by allowing early diagnosis and treatment susceptibility monitoring. Since methylation of tumor-derived DNA can be detected in the serum of cancer patients, this makes DNA methylation-based biomarkers one of the most promising diagnostic strategies. In this study, the methylation profiles of MGMT, RASSF1A, p15INK4B, and p14ARF genes were evaluated in serum free-circulating DNA and the corresponding tumor tissue in a group of 33 primary or metastatic central nervous system cancer patients. Gene promoter methylation was assessed using methylation-specific polymerase chain reaction (PCR). All the tested genes were found to be methylated to a different extent in both serum and tumor samples. In comparison to metastatic brain tumor patients, the patients with glial tumors were characterized by a higher frequency of gene hypermethylation. The hypermethylation of RASSF1A differentiated primary from metastatic brain cancers. Moreover, the gene methylation profiles observed in serum, in most cases, matched the methylation profiles detected in paired tumor samples.

Indexed as

DNA MethylationPromoter Regions, GeneticAdultAgedBiomarkers, TumorBrain NeoplasmsCyclin-Dependent Kinase Inhibitor p15DNA Modification MethylasesDNA, NeoplasmDNA Repair EnzymesEpigenesis, GeneticFemaleGene Expression ProfilingGene Expression Regulation, NeoplasticHumansMaleBiomarkers, TumorCDKN2B protein, humanCyclin-Dependent Kinase Inhibitor p15DNA Modification MethylasesDNA, NeoplasmDNA Repair EnzymesMGMT protein, humanRASSF1 protein, humanTumor Suppressor Protein p14ARFTumor Suppressor Proteins

Identifiers

PMID23661397
PMCPMC3720989
OpenAlexW2025828160

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.