Evidence map›Paper›PMID 23660835›Full record

ArticlePlant physiology2013

Involvement of AtPolλ in the repair of high salt- and DNA cross-linking agent-induced double strand breaks in Arabidopsis.

Sujit Roy, Swarup Roy Choudhury, Dibyendu N Sengupta, Kali Pada Das

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Plant tolerance mechanisms to DNA-damaging UV stress.Journal of experimental botany · 2025
    Review
  3. Article
  4. Review
  5. Article
  6. Base Excision DNA Repair in Plants:International journal of molecular sciences · 2023
    Review
  7. Article
  8. Review
  9. Article
  10. Heterologous Expression of ArabidopsisFrontiers in genetics · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. OsMre11 Is Required for Mitosis during Rice Growth and Development.International journal of molecular sciences · 2020
    Article
  15. Article
  16. Plant DNA Polymerases.International journal of molecular sciences · 2019
    Review
  17. DNA- and DNA-Protein-Crosslink Repair in Plants.International journal of molecular sciences · 2019
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sujit RoyProtein Chemistry Laboratory, Department of Chemistry, Bose Institute, Kolkata 700 009, West Bengal, India. sujitroy2006@gmail.com
Swarup Roy Choudhury
Dibyendu N Sengupta
Kali Pada Das
Bose Institute · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA polymerase λ (Pol λ) is the sole member of family X DNA polymerase in plants and plays a crucial role in nuclear DNA damage repair. Here, we report the transcriptional up-regulation of Arabidopsis (Arabidopsis thaliana) AtPolλ in response to abiotic and genotoxic stress, including salinity and the DNA cross-linking agent mitomycin C (MMC). The increased sensitivity of atpolλ knockout mutants toward high salinity and MMC treatments, with higher levels of accumulation of double strand breaks (DSBs) than wild-type plants and delayed repair of DSBs, has suggested the requirement of Pol λ in DSB repair in plants. AtPolλ overexpression moderately complemented the deficiency of DSB repair capacity in atpolλ mutants. Transcriptional up-regulation of major nonhomologous end joining (NHEJ) pathway genes KU80, X-RAY CROSS COMPLEMENTATION PROTEIN4 (XRCC4), and DNA Ligase4 (Lig4) along with AtPolλ in Arabidopsis seedlings, and the increased sensitivity of atpolλ-2/atxrcc4 and atpolλ-2/atlig4 double mutants toward high salinity and MMC treatments, indicated the involvement of NHEJ-mediated repair of salinity- and MMC-induced DSBs. The suppressed expression of NHEJ genes in atpolλ mutants suggested complex transcriptional regulation of NHEJ genes. Pol λ interacted directly with XRCC4 and Lig4 via its N-terminal breast cancer-associated C terminus (BRCT) domain in a yeast two-hybrid system, while increased sensitivity of BRCT-deficient Pol λ-expressing transgenic atpolλ-2 mutants toward genotoxins indicated the importance of the BRCT domain of AtPolλ in mediating the interactions for processing DSBs. Our findings provide evidence for the direct involvement of DNA Pol λ in the repair of DSBs in a plant genome.

Indexed as

DNA Breaks, Double-StrandedDNA RepairArabidopsisArabidopsis ProteinsCross-Linking ReagentsDNA-Binding ProteinsDNA DamageDNA-Directed DNA PolymeraseDNA End-Joining RepairDNA LigasesDNA Polymerase betaGene Expression Regulation, PlantGenome, PlantMeristemMitomycinMutationArabidopsis ProteinsCross-Linking ReagentsDNA-Binding ProteinsDNA-Directed DNA PolymeraseDNA LigasesDNA Polymerase betaDNA polymerase beta2DNA polymerase lambda, ArabidopsisLig4 protein, ArabidopsisMitomycinXRCC4 protein, Arabidopsis

Identifiers

PMID23660835
PMCPMC3668049
OpenAlexW2138719988

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.