Evidence map›Paper›PMID 23659571›Full record

ArticleThe FEBS journal2013

Human β-defensin-3 structure motifs that are important in CXCR4 antagonism.

Zhimin Feng, George R Dubyak, Xun Jia, Jacek T Lubkowski, Aaron Weinberg

Abstract read
In one paragraph

Article in The FEBS journal, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Improving Fmoc Solid Phase Synthesis of Human Beta Defensin 3.International journal of molecular sciences · 2022
    Article
  6. Endogenous Peptide Inhibitors of HIV Entry.Advances in experimental medicine and biology · 2022
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Zhimin FengDepartment of Biological Sciences, School of Dental Medicine, Case Western Reserve University, Cleveland, OH 44106-4905, USA.
George R Dubyak
Xun Jia
Jacek T Lubkowski
Aaron Weinberg

Funding

Proj. 4-The Genetic Variation of Innate Immune Genes w/Oral Manifestations of HIVP01DE019759 · NIDCR · CASE WESTERN RESERVE UNIVERSITY · PI ZIMMERMAN, PETER · 2009 to 2013
$9.0M
HBD-3-CXCR4: Molecular Mechanisms in Innate ImmunityP01DE019089 · NIDCR · CASE WESTERN RESERVE UNIVERSITY · PI WEINBERG, AARON · 2008 to 2008
$528k
Intramural NIH HHSNIDCR NIH HHS P01 DE019089NIDCR NIH HHS P01 DE019759NIDCR NIH HHS P01DE019759
6 · The paper itself

Abstract

Previously, we reported that human β-defensin (hBD)-3 can both antagonize CXCR4 function on T cells and promote receptor internalization in the absence of activation. In the present study, we explored the important structural elements of hBD-3 that are involved in blocking CXCR4 activation by its natural ligand, stromal-derived factor 1α (SDF-1α; CXCL12). Results from site-directed mutagenesis studies suggest that the ability of hBD-3 to inhibit SDF-1α-CXCR4 interaction, as assayed either by blocking SDF-1 binding to CXCR4 or antagonizing SDF-1-induced Ca(2+) mobilization, is correlated with the presence of hBD-3 cysteine residues, specific surface-distributed cationic residues, and the electrostatic properties and availability of both hBD-3 termini. Specifically, hBD-3 activity against CXCR4 is reduced by: (a) replacing all six cysteines; (b) replacing the cationic residues with acidic ones in the N-terminus and C- terminus; (c) removal of the first 10 N-terminal residues; and (d) replacing the surface-exposed basic residues Lys8, Lys32 and Arg36 with neutral ones. The hBD-3-CXCR4 interaction has potentially wide-ranging implications for HIV-related biology, as well as for a host of CXCR4-dependent activities, including hematopoiesis, neurogenesis, angiogenesis, carcinogenesis, and immune cell trafficking. CXCR4 is highly expressed on T cells, monocytes, and epithelial cells. Therefore, understanding the structure-function relationship between hBD-3 and CXCR4 that accounts for the antagonistic interaction between the two molecules may provide new insights into HIV/highly active antiretroviral therapy-related pathology, as well as novel insights into the interaction between innate and adaptive immunity at mucosal sites.

Indexed as

Signal TransductionAmino Acid MotifsAmino Acid SequenceAmino Acid Substitutionbeta-DefensinsBinding, CompetitiveCell LineChemokine CXCL12CystineHumansMolecular Sequence DataMutagenesis, Site-DirectedProtein BindingProtein Interaction Domains and MotifsProtein Structure, SecondaryReceptors, CXCR4beta-DefensinsChemokine CXCL12CXCL12 protein, humanCXCR4 protein, humanCystineDEFB103A protein, humanReceptors, CXCR4antagonismCXCR4defensinhuman β-defensin-3structure

Identifiers

PMID23659571
PMCPMC3831652

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.