Evidence map›Paper›PMID 23658693›Full record

ArticlePloS one2013

Mutations disrupting histone methylation have different effects on replication timing in S. pombe centromere.

Pao-Chen Li, Marc D Green, Susan L Forsburg

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. The CINs of the centromere.Biochemical Society transactions · 2013
    Review
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Pao-Chen LiDepartment of Molecular and Computational Biology, University of Southern California, Los Angeles, California, USA.
Marc D Green
Susan L Forsburg
University of Southern California · US

Funding

Genetic Analysis of MSM Protein Function in S. PombeR01GM059321 · NIGMS · UNIVERSITY OF SOUTHERN CALIFORNIA · PI FORSBURG, SUSAN L · 1999 to 2012
$4.7M
NIGMS NIH HHS R01 GM059321
6 · The paper itself

Abstract

The fission yeast pericentromere comprises repetitive sequence elements packaged into heterchromatin marked by histone H3K9 methylation and Swi6 binding. Transient disruption of Swi6 during S phase allows a period of RNA synthesis which programs the RNAi machinery to maintain histone methylation. However, Swi6 is also required for early replication timing. We show that not only Swi6 but also the chromodomain protein Chp1 are delocalized during S phase. Different from loss of swi6, mutations that disrupt histone methylation in the centromere, chp1Δ and clr4Δ, undergo early DNA replication. However, timing is modestly delayed in RNAi mutants dcr1Δ or rdp1Δ, while hrr1Δ mutants resemble swi6Δ in their replication delay. Finally, we show that recruitment of RNA polymerase II in the centromere occurs independently of replication. These different effects indicate that replication timing is not simply linked to histone methylation.

Indexed as

DNA ReplicationProtein Processing, Post-TranslationalCell Cycle ProteinsCentromereChromosomal Proteins, Non-HistoneChromosomes, FungalHistone-Lysine N-MethyltransferaseHistonesMethylationMethyltransferasesProtein TransportRNA InterferenceRNA Polymerase IISchizosaccharomycesSchizosaccharomyces pombe ProteinsSequence DeletionCell Cycle ProteinsChp1 protein, S pombeChromosomal Proteins, Non-Histoneclr4 protein, S pombeHistone-Lysine N-MethyltransferaseHistonesMethyltransferasesRNA Polymerase IISchizosaccharomyces pombe ProteinsSwi6 protein, S pombe

Identifiers

PMID23658693
PMCPMC3641051
OpenAlexW2060021503

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.