Evidence map›Paper›PMID 23658605›Full record

ArticlePloS one2013

Porcine E. coli: virulence-associated genes, resistance genes and adhesion and probiotic activity tested by a new screening method.

Peter Schierack, Stefan Rödiger, Christoph Kuhl, Rico Hiemann, Dirk Roggenbuck, Ganwu Li, Jörg Weinreich, Enrico Berger, Lisa K Nolan, Bryon Nicholson and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.0field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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  10. Invasin gimB found in a bovine intestinal Escherichia coli with an adherent and invasive profile.Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 2 countries.

Peter SchierackFakultät für Naturwissenschaften, Hochschule Lausitz (FH), Senftenberg, Germany. Peter.Schierack@HS-Lausitz.de
Stefan Rödiger
Christoph Kuhl
Rico Hiemann
Dirk Roggenbuck
Ganwu Li
Jörg Weinreich
Enrico Berger
Lisa K Nolan
Bryon Nicholson
Antje Römer
Ulrike Frömmel
Lothar H Wieler
Christian Schröder
Iowa State University · USAlanus University of Arts and Social Sciences · DEFederal Office of Consumer Protection and Food Safety · DEFreie Universität Berlin · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We established an automated screening method to characterize adhesion of Escherichia coli to intestinal porcine epithelial cells (IPEC-J2) and their probiotic activity against infection by enteropathogenic E. coli (EPEC). 104 intestinal E. coli isolates from domestic pigs were tested by PCR for the occurrence of virulence-associated genes, genes coding for resistances to antimicrobial agents and metals, and for phylogenetic origin by PCR. Adhesion rates and probiotic activity were examined for correlation with the presence of these genes. Finally, data were compared with those from 93 E. coli isolates from wild boars. Isolates from domestic pigs carried a broad variety of all tested genes and showed great diversity in gene patterns. Adhesions varied with a maximum of 18.3 or 24.2 mean bacteria adherence per epithelial cell after 2 or 6 hours respectively. Most isolates from domestic pigs and wild boars showed low adherence, with no correlation between adhesion/probiotic activity and E. coli genes or gene clusters. The gene sfa/foc, encoding for a subunit of F1C fimbriae did show a positive correlative association with adherence and probiotic activity; however E. coli isolates from wild boars with the sfa/foc gene showed less adhesion and probiotic activity than E. coli with the sfa/foc gene isolated from domestic pigs after 6 hour incubation. In conclusion, screening porcine E. coli for virulence associated genes genes, adhesion to intestinal epithelial cells, and probiotic activity revealed a single important adhesion factor, several probiotic candidates, and showed important differences between E. coli of domestic pigs and wild boars.

Indexed as

Gene Expression Regulation, BacterialGenes, BacterialAnimalsAnimals, WildAntibiosisBacterial AdhesionDrug Resistance, BacterialEnteropathogenic Escherichia coliEpithelial CellsEscherichia coliEscherichia coli ProteinsGenetic VariationHigh-Throughput Screening AssaysIntestinal MucosaMultigene FamilyPhylogenyEscherichia coli ProteinsymcE protein, E coli

Identifiers

PMID23658605
PMCPMC3637259
OpenAlexW2016044359

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.