Evidence map›Paper›PMID 23658227›Full record

ArticleNucleic acids research2013

The proto-oncoprotein FBI-1 interacts with MBD3 to recruit the Mi-2/NuRD-HDAC complex and BCoR and to silence p21WAF/CDKN1A by DNA methylation.

Won-Il Choi, Bu-Nam Jeon, Jae-Hyeon Yoon, Dong-In Koh, Myung-Hwa Kim, Mi-Young Yu, Kyung-Mi Lee, Youngsoo Kim, Kyunggon Kim, Sujin Susanne Hur and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 46 citations in OpenAlex.

  1. Article
  2. Article
  3. CNS Tumor with BCOR/BCORL1 Fusion: A Rare Tumor Entity.International journal of molecular sciences · 2025
    Article
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  7. Article
  8. DNA methylation in pulmonary fibrosis and lung cancer.Expert review of respiratory medicine · 2022
    Review
  9. Review
  10. Methylation status of hypothalamicFrontiers in endocrinology · 2022
    Article
  11. Kaiso Regulates DNA Methylation Homeostasis.International journal of molecular sciences · 2021
    Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 1 institution in 1 country.

Won-Il ChoiDepartment of Biochemistry and Molecular Biology, BK21 Project for Medical Science, Severance Biomedical Research Institute, Yonsei University School of Medicine, 50 Yonsei-Ro, SeoDaeMoon-Gu, Seoul, 120-752, Korea.
Bu-Nam Jeon
Jae-Hyeon Yoon
Dong-In Koh
Myung-Hwa Kim
Mi-Young Yu
Kyung-Mi Lee
Youngsoo Kim
Kyunggon Kim
Sujin Susanne Hur
Choong-Eun Lee
Kyung-Sup Kim
Man-Wook Hur
Yonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The tumour-suppressor gene CDKN1A (encoding p21Waf/Cip1) is thought to be epigenetically repressed in cancer cells. FBI-1 (ZBTB7A) is a proto-oncogenic transcription factor repressing the alternative reading frame and p21WAF/CDKN1A genes of the p53 pathway. FBI-1 interacts directly with MBD3 (methyl-CpG-binding domain protein 3) in the nucleus. We demonstrated that FBI-1 binds both non-methylated and methylated DNA and that MBD3 is recruited to the CDKN1A promoter through its interaction with FBI-1, where it enhances transcriptional repression by FBI-1. FBI-1 also interacts with the co-repressors nuclear receptor corepressor (NCoR), silencing mediator for retinoid and thyroid receptors (SMRT) and BCL-6 corepressor (BCoR) to repress transcription. MBD3 regulates a molecular interaction between the co-repressor and FBI-1. MBD3 decreases the interaction between FBI-1 and NCoR/SMRT but increases the interaction between FBI-1 and BCoR. Because MBD3 is a subunit of the Mi-2 autoantigen (Mi-2)/nucleosome remodelling and histone deacetylase (NuRD)-HDAC complex, FBI-1 recruits the Mi-2/NuRD-HDAC complex via MBD3. BCoR interacts with the Mi-2/NuRD-HDAC complex, DNMTs and HP1. MBD3 and BCoR play a significant role in the recruitment of the Mi-2/NuRD-HDAC complex- and the NuRD complex-associated proteins, DNMTs and HP. By recruiting DNMTs and HP1, Mi-2/NuRD-HDAC complex appears to play key roles in epigenetic repression of CDKN1A by DNA methylation.

Indexed as

DNA MethylationGene SilencingCell LineCells, CulturedChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneCyclin-Dependent Kinase Inhibitor p21DNA-Binding ProteinsDNA (Cytosine-5-)-MethyltransferasesHEK293 CellsHistonesHumansMi-2 Nucleosome Remodeling and Deacetylase ComplexPromoter Regions, GeneticProto-Oncogene ProteinsRepressor ProteinsBCOR protein, humanCDKN1A protein, humanChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneCyclin-Dependent Kinase Inhibitor p21DNA-Binding ProteinsDNA (Cytosine-5-)-MethyltransferasesHistonesMBD3 protein, humanMi-2 Nucleosome Remodeling and Deacetylase ComplexProto-Oncogene ProteinsRepressor ProteinsTranscription FactorsZBTB7A protein, human

Identifiers

PMID23658227
PMCPMC3711425
OpenAlexW2107301489

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.