Evidence map›Paper›PMID 23657681›Full record

ArticleMicrobiology (Reading, England)2013

RaoN, a small RNA encoded within Salmonella pathogenicity island-11, confers resistance to macrophage-induced stress.

Yong Heon Lee, Sinyeon Kim, John D Helmann, Bae-Hoon Kim, Yong Keun Park

Open access · greenAbstract read
In one paragraph

Article in Microbiology (Reading, England), 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

  1. Infection biology ofEcoSal Plus · 2024
    Review
  2. Article
  3. Tropical medicine and infectious disease · 2023
    Review
  4. Review
  5. Article
  6. Cappable-Seq Reveals Specific Patterns of Metabolism and Virulence forInternational journal of molecular sciences · 2021
    Article
  7. Article
  8. Microorganisms · 2020
    Review
  9. Review
  10. Review
  11. Review
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

Yong Heon LeeDepartment of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Sinyeon KimSchool of Life Sciences and Biotechnology, Korea University, Seoul 136-701, Korea.
John D HelmannDepartment of Microbiology, Cornell University, Ithaca, NY 14853, USA.
Bae-Hoon KimSection of Microbial Pathogenesis, Boyer Center for Molecular Medicine, Yale University School of Medicine, New Haven, CT 06510, USA.
Yong Keun ParkSchool of Life Sciences and Biotechnology, Korea University, Seoul 136-701, Korea.
Korea University · KRCornell University · USYale University · US

Funding

STRUCTURAL STUDIES OF BACILLUS SUBTILIS SIGMA FACTORSR01GM047446 · NIGMS · CORNELL UNIVERSITY ITHACA · PI HELMANN, JOHN D · 1992 to 2016
$6.7M
NIGMS NIH HHS GM04776NIGMS NIH HHS R01 GM047446
6 · The paper itself

Abstract

Bacterial small non-coding RNAs act as important regulators that control numerous cellular processes. Here we identified RaoN, a novel small RNA encoded in the cspH-envE intergenic region on Salmonella pathogenicity island-11 (SPI-11). RaoN contributes to survival under conditions of acid and oxidative stress combined with nutrient limitation, which partially mimic the intramacrophage environment. Indeed, inactivation of raoN reduces the intramacrophage replication of Salmonella enterica serovar Typhimurium. Genome-wide transcriptome analysis revealed that the lactate dehydrogenase gene ldhA is upregulated in the raoN knockout mutant. Notably, both inactivation and overexpression of ldhA in the WT strain render Salmonella more sensitive to oxidative stress, particularly when combined with nutrient limitation. However, ldhA is not the sole determinant of RaoN function in facilitating intramacrophage survival of Salmonella. Together, our data suggest that balanced regulation of ldhA expression by RaoN is necessary for survival under in vitro stress conditions and contributes to the intramacrophage growth of Salmonella.

Indexed as

Heat-Shock ResponseAnimalsBacterial ProteinsGene Expression ProfilingGene Expression Regulation, BacterialGenomic IslandsHumansL-Lactate DehydrogenaseMacrophagesMiceMutationOxidative StressRNA, Small UntranslatedSalmonellaSalmonella typhimuriumUp-RegulationBacterial ProteinsL-Lactate DehydrogenaseRNA, Small Untranslated

Identifiers

PMID23657681
PMCPMC3749724
OpenAlexW2078556329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.