Evidence map›Paper›PMID 23657238›Full record

ArticleGenes and immunity2013

Toll-like receptor-associated sequence variants and prostate cancer risk among men of African descent.

E N Rogers, D Z Jones, N C Kidd, S Yeyeodu, G Brock, C Ragin, M Jackson, N McFarlane-Anderson, M Tulloch-Reid, K Sean Kimbro and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 3 pooled it
1.0field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 3 syntheses or guidelines pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Association between Toll-like receptor 3 polymorphisms and cancer risk: a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
    Pooled it
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

E N RogersDepartment of Pharmacology and Toxicology, University of Louisville, Clinical and Translational Research Building, 505 South Hancock Street, Room 306, Louisville, KY 40202, USA.
D Z Jones
N C Kidd
S Yeyeodu
G Brock
C Ragin
M Jackson
N McFarlane-Anderson
M Tulloch-Reid
K Sean Kimbro
L R Kidd
University of Louisville · USUniversity of the West Indies System · JMNorth Carolina Central University · USFox Chase Cancer Center · US

Funding

ROLES OF INFLAMMATION AND ANDROGEN METABOLISM IN PROSTATE CANCER DISPARITYP20MD000175 · NIMHD · NORTH CAROLINA CENTRAL UNIVERSITY · PI GREENE, NATASHA · 2002 to 2016
$15.6M
NIMHD NIH HHS P20 MD000175NIMHD NIH HHS P20-MD000175
6 · The paper itself

Abstract

Recent advances demonstrate a relationship between chronic/recurrent inflammation and prostate cancer (PCA). Among inflammatory regulators, toll-like receptors (TLRs) have a critical role in innate immune responses. However, it remains unclear whether variant TLR genes influence PCA risk among men of African descent. Therefore, we evaluated the impact of 32 TLR-associated single-nucleotide polymorphisms (SNPs) on PCA risk among African Americans and Jamaicans. SNP profiles of 814 subjects were evaluated using Illumina's Veracode genotyping platform. Single and combined effects of SNPs in relation to PCA risk were assessed using age-adjusted logistic regression and entropy-based multifactor dimensionality reduction (MDR) models. Seven sequence variants detected in TLR6, TOLLIP (Toll-interacting protein), IRAK4 (interleukin-1 receptor-associated kinase 4) and IRF3 (interferon regulatory factor 3) were marginally related to PCA. However, none of these effects remained significant after adjusting for multiple hypothesis testing. Nevertheless, MDR modeling revealed a complex interaction between IRAK4 rs4251545 and TLR2 rs1898830 as a significant predictor of PCA risk among US men (permutation testing P-value=0.001). However, these findings require further assessment and validation.

Indexed as

Genetic Predisposition to DiseasePolymorphism, Single NucleotideAgedAged, 80 and overBlack or African AmericanCase-Control StudiesHumansInterferon Regulatory Factor-3Interleukin-1 Receptor-Associated KinasesIntracellular Signaling Peptides and ProteinsMaleMiddle AgedProstatic NeoplasmsToll-Like Receptor 2Toll-Like Receptor 6Interferon Regulatory Factor-3Interleukin-1 Receptor-Associated KinasesIntracellular Signaling Peptides and ProteinsIRAK4 protein, humanIRF3 protein, humanTLR2 protein, humanTLR6 protein, humanTOLLIP protein, humanToll-Like Receptor 2Toll-Like Receptor 6

Identifiers

PMID23657238
PMCPMC3743959
OpenAlexW1971771753

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.