Evidence map›Paper›PMID 23653356›Full record

ArticleThe Journal of biological chemistry2013

Hsp70 targets a cytoplasmic quality control substrate to the San1p ubiquitin ligase.

Christopher J Guerriero, Kurt F Weiberth, Jeffrey L Brodsky

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed
5.5field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. HSP70-binding motifs function as protein quality control degrons.Cellular and molecular life sciences : CMLS · 2023
    Article
  6. Article
  7. Quality control of cytoplasmic proteins inside the nucleus.Computational and structural biotechnology journal · 2022
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Genetic Selection Based on a Ste6G3 (Bethesda, Md.) · 2020
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Christopher J GuerrieroDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA.
Kurt F Weiberth
Jeffrey L Brodsky
University of Pittsburgh · US

Funding

Single Nephron and MetabolomicsP30DK079307 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI JACKSON, EDWIN KERRY · 2008 to 2022
$13.4M
ER Associated Degradation of Membrane Proteins in YeastR01GM075061 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BRODSKY, JEFFREY L. · 2006 to 2019
$3.2M
The Energetic Cost of Protein Retrotranslocation during ER-associated DegradationF32GM090364 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GUERRIERO, CHRISTOPHER JAMES · 2010 to 2012
$126k
NIDDK NIH HHS DK79307NIDDK NIH HHS P30 DK079307NIGMS NIH HHS 1F32GM090364NIGMS NIH HHS F32 GM090364NIGMS NIH HHS GM75061NIGMS NIH HHS R01 GM075061
6 · The paper itself

Abstract

Accumulation of misfolded proteins in cellular compartments can result in stress-induced cell death. In the endoplasmic reticulum (ER), ER-associated degradation clears aberrant proteins from the secretory pathway. In the cytoplasm and nucleus, this job is left to the cytoplasmic quality control (CytoQC) machinery. Both processes utilize chaperones and the ubiquitin-proteasome system to aid in protein elimination. Previous studies in yeast have drawn comparisons between these processes using data from structurally and topologically different substrates. We sought to draw a direct comparison between ERAD and CytoQC by studying the elimination of a single misfolded domain that, depending on its residence, is disposed by either of these pathways. The truncated, second nucleotide binding domain (NBD2*) from a yeast ERAD substrate, Ste6p*, resides at the cytoplasmic face of the ER. We show that a soluble form of NBD2* is cytoplasmic and unlike wild-type NBD2 is targeted for proteasome-mediated degradation. In contrast to Ste6p*, which employs the ER-localized Doa10p ubiquitin ligase, NBD2* is ubiquitinated by a nuclear E3 ligase San1p, a factor that is also required for its degradation. Although the yeast cytoplasmic Hsp70 chaperone, Ssa1p, has been thought to facilitate the nuclear import or to maintain the solubility of most CytoQC substrates, we discovered that Ssa1p facilitates the interaction between San1p and NBD2*, demonstrating that chaperones can aid in substrate recognition and San1p-dependent protein degradation. These results emphasize the diverse action of molecular chaperones during CytoQC.

Indexed as

Active Transport, Cell NucleusAdenosine TriphosphatasesATP-Binding Cassette TransportersBinding SitesCell Cycle ProteinsCell NucleusCytoplasmEndoplasmic ReticulumEndoplasmic Reticulum-Associated DegradationHSP70 Heat-Shock ProteinsImmunoblottingMicroscopy, FluorescenceMutationProteasome Endopeptidase ComplexProtein BindingSaccharomyces cerevisiaeAdenosine TriphosphatasesATP-Binding Cassette TransportersCDC48 protein, S cerevisiaeCell Cycle ProteinsHSP70 Heat-Shock ProteinsProteasome Endopeptidase ComplexSaccharomyces cerevisiae ProteinsSAN1 protein, S cerevisiaeSSA1 protein, S cerevisiaeSSM4 protein, S cerevisiaeSTE6 protein, S cerevisiaeUbiquitinUbiquitin-Protein LigasesUBR1 protein, S cerevisiaeValosin Containing ProteinCdc48E3 Ubiquitin LigaseERADHsp40Hsp70Molecular ChaperoneProteasomeSsa1pUbiquitin

Identifiers

PMID23653356
PMCPMC3689992
OpenAlexW1991307332

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.