Evidence map›Paper›PMID 23652012›Full record

ArticleNature communications2013

SMRT compounds abrogate cellular phenotypes of ataxia telangiectasia in neural derivatives of patient-specific hiPSCs.

Peiyee Lee, Nathan T Martin, Kotoka Nakamura, Soheila Azghadi, Mandana Amiri, Uri Ben-David, Susan Perlman, Richard A Gatti, Hailiang Hu, William E Lowry

Open access · bronzeAbstract read
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In one paragraph

Article in Nature communications, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Chromosome instability syndromes.Nature reviews. Disease primers · 2019
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Pluripotent stem cells in disease modelling and drug discovery.Nature reviews. Molecular cell biology · 2016
    Review
  13. Review
  14. Article
  15. Review
  16. Review
  17. Review
  18. Stem cells: the pursuit of genomic stability.International journal of molecular sciences · 2014
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Peiyee LeeEli and Edythe Broad Center for Regenerative Medicine, UCLA, Los Angeles, California 90095, USA.
Nathan T Martin
Kotoka Nakamura
Soheila Azghadi
Mandana Amiri
Uri Ben-David
Susan Perlman
Richard A Gatti
Hailiang Hu
William E Lowry
University of California, Los Angeles · USBroad Center · USHebrew University of Jerusalem · IL

Funding

Roles of sumoylation and alternative polyadenylation in cellular reprogrammingP01GM099134 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI PLATH, KATHRIN · 2011 to 2021
$20.3M
DRUG-INDUCED ATM READTHROUGH OF PTC MUTATIONSR01NS052528 · NINDS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GATTI, RICHARD A · 2007 to 2011
$1.8M
NIGMS NIH HHS P01 GM099134NINDS NIH HHS R01NS052528
6 · The paper itself

Abstract

Ataxia telangiectasia is a devastating neurodegenerative disease caused primarily by loss of function mutations in ATM, a hierarchical DNA repair gene and tumour suppressor. So far, murine models of ataxia telangiectasia have failed to accurately recapitulate many aspects of the disease, most notably, the progressive cerebellar ataxia. Here we present a model of human ataxia telangiectasia using induced pluripotent stem cells, and show that small molecule read-through compounds, designed to induce read-through of mRNA around premature termination codons, restore ATM activity and improve the response to DNA damage. This platform allows for efficient screening of novel compounds, identification of target and off-target effects, and preclinical testing on relevant cell types for the pathogenic dissection and treatment of ataxia telangiectasia.

Indexed as

Ataxia TelangiectasiaAtaxia Telangiectasia Mutated ProteinsCell LineCellular ReprogrammingDNA DamageDNA RepairFibroblastsHistonesHumansInduced Pluripotent Stem CellsNeural Stem CellsNeuronsPhenotypePhosphorylationRadiation, IonizingSmall Molecule LibrariesAtaxia Telangiectasia Mutated ProteinsH2AX protein, humanHistonesSmall Molecule Libraries

Identifiers

PMID23652012
OpenAlexW1977898659

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.