Evidence map›Paper›PMID 23651119›Full record

ArticleMolecular ecology2013

Mass flowering of the tropical tree Shorea beccariana was preceded by expression changes in flowering and drought-responsive genes.

Masaki J Kobayashi, Yayoi Takeuchi, Tanaka Kenta, Tomonori Kume, Bibian Diway, Kentaro K Shimizu

Abstract read
In one paragraph

Article in Molecular ecology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Transcriptomic responses of oil palm (Frontiers in plant science · 2023
    Article
  6. Article
  7. Article
  8. Studying the genetic basis of masting.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2021
    Article
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Masaki J KobayashiInstitute of Evolutionary Biology and Environmental Studies, Institute of Plant Biology and Zurich-Basel Plant Science Center, University of Zurich, CH-8057 Zurich, Switzerland.
Yayoi Takeuchi
Tanaka Kenta
Tomonori Kume
Bibian Diway
Kentaro K Shimizu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Community-level mass flowering, known as general flowering, which occurs in South-East Asia at supra-annual irregular intervals, is considered a particularly spectacular phenomenon in tropical ecology. Recent studies have proposed several proximate factors inducing general flowering, such as drought and falls in minimum temperature. However, limited empirical data on the developmental and physiological processes have been available to test the significance of such factors. To overcome this limitation and test the hypotheses that general flowering is triggered by the proposed factors, we conducted an 'ecological transcriptome' study of a mass flowering species, Shorea beccariana, comparing meteorological data with genome-wide expression patterns obtained using next-generation sequencing. Among the 98 flowering-related genes identified, the homologs of a floral pathway integrator, SbFT, and a floral repressor, SbSVP, showed dramatic transcriptional changes before flowering, and their flowering functions were confirmed using transgenic Arabidopsis thaliana. Expression in drought-responsive and sucrose-induced genes also changed before flowering. All these expression changes occurred when the flowering-inducing level of drought was reached, as estimated using data from the preceding 10 years. These genome-wide expression data support the hypothesis that drought is a trigger for general flowering.

Indexed as

DroughtsGene Expression Regulation, PlantGenes, PlantArabidopsisAsia, SoutheasternDipterocarpaceaeFlowersGene Expression ProfilingGene LibraryMolecular Sequence DataPlants, Genetically ModifiedStress, PhysiologicalTranscriptomeDipterocarpaceaeflowering timemass floweringnext-generation sequencingShorea beccarianatranscriptomics

Identifiers

PMID23651119
PMCPMC3817532

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.