Evidence map›Paper›PMID 23651061›Full record

ArticleBiochemistry2013

Peptide-targeted delivery of a pH sensor for quantitative measurements of intraglycosomal pH in live Trypanosoma brucei.

Sheng Lin, Meredith T Morris, P Christine Ackroyd, James C Morris, Kenneth A Christensen

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 18 citations in OpenAlex.

  1. Measuring Dynamic Glycosomal pH Changes in Living Trypanosoma brucei.Journal of visualized experiments : JoVE · 2024
    Article
  2. Structure, Properties, and Function of Glycosomes inFrontiers in cellular and infection microbiology · 2020
    Review
  3. Article
  4. A targeted delivery strategy for the development of potent trypanocides.Chemical communications (Cambridge, England) · 2017
    Article
  5. pH regulation in glycosomes of procyclic formThe Journal of biological chemistry · 2017
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Sheng LinDepartment of Chemistry and ‡Department of Genetics and Biochemistry, Clemson University , Clemson, South Carolina 29634, United States.
Meredith T Morris
P Christine Ackroyd
James C Morris
Kenneth A Christensen
Clemson University · US

Funding

Nutrient Sensing and Hexokinases in T. bruceiR15AI075326 · NIAID · CLEMSON UNIVERSITY · PI MORRIS, JAMES CULVIN · 2008 to 2012
$585k
NIAID NIH HHS 1R15AI075326NIAID NIH HHS R15 AI075326
6 · The paper itself

Abstract

Studies of dynamic changes in organelles of protozoan parasite Trypanosoma brucei have been limited, in part because of the difficulty of targeting analytical probes to specific subcellular compartments. Here we demonstrate application of a ratiometric probe for pH quantification in T. brucei glycosomes. The probe consists of a peptide encoding the peroxisomal targeting sequence (F-PTS1, acetyl-CKGGAKL) coupled to fluorescein, which responds to pH. When incubated with living parasites, the probe is internalized within vesicular structures that colocalize with a glycosomal marker. Inhibition of uptake of F-PTS1 at 4 °C and pulse-chase colocalization with fluorescent dextran suggested that the probe is initially taken up by non-receptor-mediated endocytosis but is subsequently transported separately from dextran and localized within glycosomes, prior to the final fusion of labeled glycosomes and lysosomes as part of glycosomal turnover. Intraorganellar measurements and pH calibration with F-PTS1 in T. brucei glycosomes indicate that the resting glycosomal pH under physiological conditions is 7.4 ± 0.2. However, incubation in glucose-depleted buffer triggered mild acidification of the glycosome over a period of 20 min, with a final observed pH of 6.8 ± 0.3. This glycosomal acidification was reversed by reintroduction of glucose. Coupling of ratiometric fluorescent sensors and reporters to PTS peptides offers an invaluable tool for monitoring in situ glycosomal response(s) to changing environmental conditions and could be applied to additional kinetoplastid parasites.

Indexed as

Hydrogen-Ion ConcentrationAnimalsFlow CytometryMicrobodiesSubcellular FractionsTrypanosoma brucei brucei

Identifiers

PMID23651061
PMCPMC5507074
OpenAlexW2053618104

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.