Evidence map›Paper›PMID 23650881›Full record

ArticleBiochemistry2013

Conformational properties of peptides corresponding to the ebolavirus GP2 membrane-proximal external region in the presence of micelle-forming surfactants and lipids.

Lauren K Regula, Richard Harris, Fang Wang, Chelsea D Higgins, Jayne F Koellhoffer, Yue Zhao, Kartik Chandran, Jianmin Gao, Mark E Girvin, Jonathan R Lai

Abstract read
In one paragraph

Article in Biochemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. A Review: The Antiviral Activity of Cyclic Peptides.International journal of peptide research and therapeutics · 2023
    Review
  3. Article
  4. Membranotropic peptides mediating viral entry.Peptide science (Hoboken, N.J.) · 2018
    Review
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Lauren K RegulaDepartment of Biochemistry and ‡Department of Microbiology and Immunology, Albert Einstein College of Medicine , 1300 Morris Park Avenue, Bronx, New York 10461, United States.
Richard Harris
Fang Wang
Chelsea D Higgins
Jayne F Koellhoffer
Yue Zhao
Kartik Chandran
Jianmin Gao
Mark E Girvin
Jonathan R Lai
Boston College · USYeshiva University · USBipar · FR

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Structural Analysis of Multidrug TransportR01GM072085 · NIGMS · ALBERT EINSTEIN COL OF MED YESHIVA UNIV · PI GIRVIN, MARK E. · 2004 to 2014
$2.7M
Mechanisms of Ebolavirus and Marburgvirus Entry into CellsR01AI088027 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CHANDRAN, KARTIK · 2010 to 2014
$2.0M
Targeting Viral Envelope Glycoproteins with Synthetic AntibodiesR01AI090249 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI LAI, JONATHAN R. · 2010 to 2014
$2.0M
Ebolavirus and marburgvirus entry into cellsR56AI088027 · NIAID · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI CHANDRAN, KARTIK · 2017 to 2017
$512k
NIAID NIH HHS AI088027NIAID NIH HHS AI090249NIAID NIH HHS R01 AI088027NIAID NIH HHS R01 AI090249NIAID NIH HHS R56 AI088027NIGMS NIH HHS GM072085NIGMS NIH HHS R01 GM072085NIGMS NIH HHS T32 GM007288
6 · The paper itself

Abstract

Ebola virus and Sudan virus are members of the family Filoviridae of nonsegmented negative-strand RNA viruses ("filoviruses") that cause severe hemorrhagic fever with fatality rates as high as 90%. Infection by filoviruses requires membrane fusion between the host and the virus; this process is facilitated by the two subunits of the envelope glycoprotein, GP1 (the surface subunit) and GP2 (the transmembrane subunit). The membrane-proximal external region (MPER) is a Trp-rich segment that immediately precedes the transmembrane domain of GP2. In the analogous glycoprotein for HIV-1 (gp41), the MPER is critical for membrane fusion and is the target of several neutralizing antibodies. However, the role of the MPER in filovirus GP2 and its importance in membrane fusion have not been established. Here, we characterize the conformational properties of peptides representing the GP MPER segments of Ebola virus and Sudan virus in the presence of micelle-forming surfactants and lipids, at pH 7 and 4.6. Circular dichroism spectroscopy and tryptophan fluorescence indicate that the GP2 MPER peptides bind to micelles of sodium dodecyl sulfate and dodecylphosphocholine (DPC). Nuclear magnetic resonance spectroscopy of the Sudan virus MPER peptide revealed that residues 644-651 interact directly with DPC, and that this interaction enhances the helical conformation of the peptide. The Sudan virus MPER peptide was found to moderately inhibit cell entry by a GP-pseudotyped vesicular stomatitis virus but did not induce leakage of a fluorescent molecule from a large unilammellar vesicle comprised of 1-palmitoyl-2-oleoylphosphatidylcholine or cause hemolysis. Taken together, this analysis suggests the filovirus GP2 MPER binds and inserts shallowly into lipid membranes.

Indexed as

Amino Acid SequenceEbolavirusHumansMicellesMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularPeptidesPhosphorylcholineProtein ConformationSurface-Active AgentsTryptophanViral Envelope Proteinsdodecylphosphocholineenvelope glycoprotein, Ebola virusMicellesPeptidesPhosphorylcholineSurface-Active AgentsTryptophanViral Envelope Proteins

Identifiers

PMID23650881
PMCPMC3772975
OpenAlexW2087364567

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.