Evidence map›Paper›PMID 23650345›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2013

Mycobacterial toxin MazF-mt6 inhibits translation through cleavage of 23S rRNA at the ribosomal A site.

Jason M Schifano, Regina Edifor, Jared D Sharp, Ming Ouyang, Arvind Konkimalla, Robert N Husson, Nancy A Woychik

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Long Dynamic β1-β2 Loops inInternational journal of molecular sciences · 2024
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  19. Conserved Amino Acid Moieties ofFrontiers in microbiology · 2021
    Article
  20. Article

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jason M SchifanoDepartment of Biochemistry and Molecular Biology, Robert Wood Johnson Medical School at Rutgers University, Piscataway, NJ 08854, USA.
Regina Edifor
Jared D Sharp
Ming Ouyang
Arvind Konkimalla
Robert N Husson
Nancy A Woychik

Funding

Characterization of M. tuberculosis kinases PknA &PknBR01AI059702 · NIAID · CHILDREN'S HOSPITAL BOSTON · PI HUSSON, ROBERT N · 2004 to 2008
$1.9M
VIRUS-HOST INTERACTIONS IN EUKARYOTIC CELLST32AI007403 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI BREWER, GARY A. · 1991 to 2014
$1.7M
Membrane Protein Production Using the Yeast SPP SystemR01GM095693 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI WOYCHIK, NANCY ANN · 2010 to 2013
$1.3M
Functional Dissection of Toxin-Antitoxin Systems in Mycobacterium tuberculosisR21AI072399 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI WOYCHIK, NANCY ANN · 2009 to 2010
$463k
Stress-potentiated screening to identify novel inhibitors of M. tuberculosisR21AI097881 · NIAID · BOSTON CHILDREN'S HOSPITAL · PI HUSSON, ROBERT N · 2012 to 2013
$451k
NIAID NIH HHS 5T32AI007403-18NIAID NIH HHS R01 AI059702NIAID NIH HHS R21 AI072399NIAID NIH HHS R21 AI097881NIAID NIH HHS T32 AI007403NIGMS NIH HHS R01 GM095693
6 · The paper itself

Abstract

The Mycobacterium tuberculosis genome contains an unusually high number of toxin-antitoxin modules, some of which have been suggested to play a role in the establishment and maintenance of latent tuberculosis. Nine of these toxin-antitoxin loci belong to the mazEF family, encoding the intracellular toxin MazF and its antitoxin inhibitor MazE. Nearly every MazF ortholog recognizes a unique three- or five-base RNA sequence and cleaves mRNA. As a result, these toxins selectively target a subset of the transcriptome for degradation and are known as "mRNA interferases." Here we demonstrate that a MazF family member from M. tuberculosis, MazF-mt6, has an additional role--inhibiting translation through targeted cleavage of 23S rRNA in the evolutionarily conserved helix/loop 70. We first determined that MazF-mt6 cleaves mRNA at (5')UU↓CCU(3') sequences. We then discovered that MazF-mt6 also cleaves M. tuberculosis 23S rRNA at a single UUCCU in the ribosomal A site that contacts tRNA and ribosome recycling factor. To gain further mechanistic insight, we demonstrated that MazF-mt6-mediated cleavage of rRNA can inhibit protein synthesis in the absence of mRNA cleavage. Finally, consistent with the position of 23S rRNA cleavage, MazF-mt6 destabilized 50S-30S ribosomal subunit association. Collectively, these results show that MazF toxins do not universally act as mRNA interferases, because MazF-mt6 inhibits protein synthesis by cleaving 23S rRNA in the ribosome active center.

Indexed as

Bacterial ProteinsMycobacterium tuberculosisProtein BiosynthesisRibosome Subunits, Large, BacterialRibosome Subunits, Small, BacterialRNA, BacterialRNA-Binding ProteinsRNA, MessengerRNA, Ribosomal, 23SBacterial ProteinsRNA, BacterialRNA-Binding ProteinsRNA, MessengerRNA, Ribosomal, 23S

Identifiers

PMID23650345
PMCPMC3666664

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.