Evidence map›Paper›PMID 23649504›Full record

ArticleJournal of molecular neuroscience : MN2013

Novel gene expression model for outcome prediction in paediatric medulloblastoma.

Magdalena Zakrzewska, Sylwia M Grešner, Krzysztof Zakrzewski, Beata Zalewska-Szewczyk, Pawel P Liberski

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Article in Journal of molecular neuroscience : MN, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.3field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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  2. Review
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  4. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Magdalena ZakrzewskaDepartment of Molecular Pathology and Neuropathology, Chair of Oncology, Medical University of Lodz, Czechoslowacka 8/10 str, 92-216, Lodz, Poland, magdalena.zakrzewska@umed.lodz.pl.
Sylwia M Grešner
Krzysztof Zakrzewski
Beata Zalewska-Szewczyk
Pawel P Liberski
Medical University of Lodz · PLPolish Mother’s Memorial Hospital Research Institute · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Medulloblastoma is the most frequent type of embryonal tumour in the paediatric population. The disease progression in patients with this tumour may be connected with the presence of stem/tumour-initiating cells, but the precise source and characteristics of such cells is still a subject of debate. Thus, we tried to analyse biomarkers for which a connection with the presence of stem/tumour-initiating cells was suggested. We evaluated the transcriptional level of the ATOH1, FUT4, NGFR, OTX1, OTX2, PROM1 and SOX1 genes in 48 samples of medulloblastoma and analysed their usefulness in the prediction of disease outcome. The analyses showed a strong correlation of PROM1, ATOH1 and OTX1 gene expression levels with the outcome (p ≤ 0.2). On the basis of the multivariate Cox regression analysis, we propose a three-gene model predicting risk of the disease, calculated as follows: RS(risk score) =( 0:81 x PROM1) + (0:18 x OTX1) + (0:02 x ATOH1). Survival analysis revealed a better outcome among standard-risk patients, with a 5-year survival rate of 65 %, compared to the 40 % rate observed among high-risk patients. The most promising advantage of such molecular analysis consists in the identification of molecular markers influencing clinical behaviour, which may in turn be useful in therapy optimization.

Indexed as

Transcription, GeneticAC133 AntigenAdolescentAntigens, CDBasic Helix-Loop-Helix ProteinsChildChild, PreschoolFemaleFucosyltransferasesGlycoproteinsHumansInfantLewis X AntigenMaleMedulloblastomaNeoplasms, Germ Cell and EmbryonalAC133 AntigenAntigens, CDATOH1 protein, humanBasic Helix-Loop-Helix ProteinsFucosyltransferasesFUT4 protein, humanGlycoproteinsLewis X AntigenNerve Tissue ProteinsNGFR protein, humanOTX1 protein, humanOTX2 protein, humanOtx Transcription FactorsPeptidesPROM1 protein, humanReceptors, Nerve Growth FactorSOX1 protein, humanSOXB1 Transcription Factors

Identifiers

PMID23649504
OpenAlexW2140085836

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.