Evidence map›Paper›PMID 23645666›Full record

ArticleThe Journal of biological chemistry2013

The bacterial translocon SecYEG opens upon ribosome binding.

Denis G Knyazev, Alexander Lents, Eberhard Krause, Nicole Ollinger, Christine Siligan, Daniel Papinski, Lukas Winter, Andreas Horner, Peter Pohl

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 47 citations in OpenAlex.

  1. Article
  2. Article
  3. YidC fromBiomolecules · 2023
    Article
  4. Multiple pore lining residues modulate water permeability of GlpF.Protein science : a publication of the Protein Society · 2022
    Article
  5. Article
  6. Article
  7. The Dynamic SecYEG Translocon.Frontiers in molecular biosciences · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Denis G KnyazevInstitute of Biophysics, Johannes Kepler University Linz, A-4020 Linz, Austria.
Alexander Lents
Eberhard Krause
Nicole Ollinger
Christine Siligan
Daniel Papinski
Lukas Winter
Andreas Horner
Peter Pohl
Johannes Kepler University of Linz · ATLeibniz Association · DE

Funding

Austrian Science Fund FWF P 20872
6 · The paper itself

Abstract

In co-translational translocation, the ribosome funnel and the channel of the protein translocation complex SecYEG are aligned. For the nascent chain to enter the channel immediately after synthesis, a yet unidentified signal triggers displacement of the SecYEG sealing plug from the pore. Here, we show that ribosome binding to the resting SecYEG channel triggers this conformational transition. The purified and reconstituted SecYEG channel opens to form a large ion-conducting channel, which has the conductivity of the plug deletion mutant. The number of ion-conducting channels inserted into the planar bilayer per fusion event roughly equals the number of SecYEG channels counted by fluorescence correlation spectroscopy in a single proteoliposome. Thus, the open probability of the channel must be close to unity. To prevent the otherwise lethal proton leak, a closed post-translational conformation of the SecYEG complex bound to a ribosome must exist.

Indexed as

Escherichia coli ProteinsIon Channel GatingIon ChannelsLipid BilayersMembrane LipidsMembrane ProteinsMicroscopy, ConfocalMultiprotein ComplexesMutationProtein BindingProtein TransportRibosomesSEC Translocation ChannelsSpectrometry, FluorescenceEscherichia coli ProteinsIon ChannelsLipid BilayersMembrane LipidsMembrane ProteinsMultiprotein ComplexesSecE protein, E coliSecG protein, E coliSEC Translocation ChannelsSecY protein, E coliChannel GatingMembrane BilayerMembrane BiophysicsMembrane ReconstitutionPermeabilityProtein Translocation

Identifiers

PMID23645666
PMCPMC3689939
OpenAlexW2009843970

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.