Evidence map›Paper›PMID 23644505›Full record

ArticleNature immunology2013

Activation of caspase-1 by the NLRP3 inflammasome regulates the NADPH oxidase NOX2 to control phagosome function.

Anna Sokolovska, Christine E Becker, W K Eddie Ip, Vijay A K Rathinam, Matthew Brudner, Nicholas Paquette, Antoine Tanne, Sivapriya K Vanaja, Kathryn J Moore, Katherine A Fitzgerald and 2 more

Open access · greenAbstract read
In one paragraph

Article in Nature immunology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 127 papers.

0numbers the graph read from it
0cells of the map it votes in
127citing papers in PubMed
9.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

127 citing papers in PubMed, 201 citations in OpenAlex.

  1. Article
  2. Review
  3. Infection and immunity · 2026
    Article
  4. Article
  5. Review
  6. Review
  7. Review
  8. bioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Review
  11. The concealed side of caspases: beyond a killer of cells.Cellular and molecular life sciences : CMLS · 2024
    Review
  12. Review
  13. NLRP3 Inflammasomes: Dual Function in Infectious Diseases.Journal of immunology (Baltimore, Md. : 1950) · 2024
    Review
  14. Article
  15. Article
  16. Review
  17. Review
  18. High Lethality ofInfection and immunity · 2023
    Article
  19. Article
  20. Article

67 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 1 country.

Anna SokolovskaDevelopmental Immunology and Center for Computational and Integrative Biology, Massachusetts General Hospital and Harvard Medical School, Boston, Massachusetts, USA. asokolovska@partners.org
Christine E Becker
W K Eddie Ip
Vijay A K Rathinam
Matthew Brudner
Nicholas Paquette
Antoine Tanne
Sivapriya K Vanaja
Kathryn J Moore
Katherine A Fitzgerald
Adam Lacy-Hulbert
Lynda M Stuart
Harvard University · USUniversity of Massachusetts Chan Medical School · USColumbia University Irving Medical Center · USMassachusetts General Hospital · US

Funding

Treatments for Nipah Virus InfectionU54AI057159 · NIAID · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI KASPER, DENNIS L. · 2003 to 2013
$113.7M
Pilot & Feasibility ProgramP30DK043351 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI RAYMOND T CHUNG · 1991 to 2026
$35.3M
Mechanisms of CD36 Signal TransductionR01AG020255 · NIA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MOORE, KATHRYN J · 2001 to 2011
$3.7M
The role of the phagosome in innate immune sensingR01AI079198 · NIAID · MASSACHUSETTS GENERAL HOSPITAL · PI STUART, LYNDA · 2008 to 2012
$2.4M
DNA sensors and associated signaling pathways in the innate immune responseR01AI093752 · NIAID · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI FITZGERALD, KATHERINE A. · 2012 to 2016
$1.7M
Dendritic Cell Control of Intestinal T Cell ResponsesR01DK093695 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI LACY-HULBERT, ADAM · 2012 to 2015
$1.4M
NIAID NIH HHS R01 AI079198NIAID NIH HHS R01 AI093752NIAID NIH HHS U54 AI057159NIA NIH HHS R01 AG020255NIDDK NIH HHS P30 DK043351NIDDK NIH HHS R01 DK093695
6 · The paper itself

Abstract

Phagocytosis is a fundamental cellular process that is pivotal for immunity as it coordinates microbial killing, innate immune activation and antigen presentation. An essential step in this process is phagosome acidification, which regulates many functions of these organelles that allow phagosomes to participate in processes that are essential to both innate and adaptive immunity. Here we report that acidification of phagosomes containing Gram-positive bacteria is regulated by the NLRP3 inflammasome and caspase-1. Active caspase-1 accumulates on phagosomes and acts locally to control the pH by modulating buffering by the NADPH oxidase NOX2. These data provide insight into a mechanism by which innate immune signals can modify cellular defenses and establish a new function for the NLRP3 inflammasome and caspase-1 in host defense.

Indexed as

AnimalsCarrier ProteinsCaspase 1Cells, CulturedEnzyme ActivationFlow CytometryHEK293 CellsHost-Pathogen InteractionsHumansHydrogen-Ion ConcentrationImmunoblottingInflammasomesMacrophagesMembrane GlycoproteinsMiceMice, 129 StrainCarrier ProteinsCaspase 1Cybb protein, mouseInflammasomesMembrane GlycoproteinsNADPH Oxidase 2NADPH OxidasesNLR Family, Pyrin Domain-Containing 3 ProteinNlrp3 protein, mouseReactive Oxygen Species

Identifiers

PMID23644505
PMCPMC3708594
OpenAlexW2125773632

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.