Evidence map›Paper›PMID 23644035›Full record

ReviewBiochimica et biophysica acta2014

Immuno-spin trapping from biochemistry to medicine: advances, challenges, and pitfalls. Focus on protein-centered radicals.

Sandra E Gomez-Mejiba, Zili Zhai, Maria C Della-Vedova, Marcos D Muñoz, Saurabh Chatterjee, Rheal A Towner, Kenneth Hensley, Robert A Floyd, Ronald P Mason, Dario C Ramirez

Open access · bronzeAbstract readReview
In one paragraph

Review in Biochimica et biophysica acta, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
5.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
  2. Article
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  7. Article
  8. Review
  9. Article
  10. Review
  11. The nitrone spin trap 5,5-dimethyl-1-pyrroline N-oxide dampens lipopolysaccharide-induced transcriptomic changes in macrophages.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2018
    Article
  12. Review
  13. Article
  14. Article
  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 2 countries.

Sandra E Gomez-MejibaLaboratory of Experimental Medicine and Therapeutics, Institute Multidisciplinary of Biological Investigations-San Luis (IMIBIO-SL), National Bureau of Science and Technology (CONICET) and National University of San Luis, San Luis, 5700 San Luis, Argentina.
Zili Zhai
Maria C Della-Vedova
Marcos D Muñoz
Saurabh Chatterjee
Rheal A Towner
Kenneth Hensley
Robert A Floyd
Ronald P Mason
Dario C Ramirez
Consejo Nacional de Investigaciones Científicas y Técnicas · AROklahoma Medical Research Foundation · USNational Institute of Environmental Health Sciences · USNational University of San Luis · ARUniversity of Chicago · USUniversity of South Carolina · USUniversity of Toledo Medical Center · US

Funding

Protein Derived RadicalsZIAES050139 · NIEHS · NATIONAL INSTITUTE OF ENVIRONMENTAL HEALTH SCIENCES · PI MASON, RONALD P · 2009 to 2018
$17.5M
Free Radical Mechanism in Obesity Potentiation of Environmental HepatotoxicityR00ES019875 · NIEHS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI CHATTERJEE, SAURABH · 2012 to 2014
$747k
Free Radicals and Redox Signaling Triggered by Lipopolysccharide in MacrophagesR00ES015415 · NIEHS · OKLAHOMA MEDICAL RESEARCH FOUNDATION · PI RAMIREZ, DARIO C · 2008 to 2010
$732k
NIEHS NIH HHS 4R00ES019875-02NIEHS NIH HHS 5R00ES015415-04NIEHS NIH HHS R00 ES015415NIEHS NIH HHS R00 ES019875
6 · The paper itself

Abstract

backgroundImmuno-spin trapping (IST) is based on the reaction of a spin trap with a free radical to form a stable nitrone adduct, followed by the use of antibodies, rather than traditional electron paramagnetic resonance spectroscopy, to detect the nitrone adduct. IST has been successfully applied to mechanistic in vitro studies, and recently, macromolecule-centered radicals have been detected in models of drug-induced agranulocytosis, hepatotoxicity, cardiotoxicity, and ischemia/reperfusion, as well as in models of neurological, metabolic and immunological diseases. SCOPE OF THE REVIEW: To critically evaluate advances, challenges, and pitfalls as well as the scientific opportunities of IST as applied to the study of protein-centered free radicals generated in stressed organelles, cells, tissues and animal models of disease and exposure. MAJOR

conclusionsBecause the spin trap has to be present at high enough concentrations in the microenvironment where the radical is formed, the possible effects of the spin trap on gene expression, metabolism and cell physiology have to be considered in the use of IST and in the interpretation of results. These factors have not yet been thoroughly dealt with in the literature. GENERAL SIGNIFICANCE: The identification of radicalized proteins during cell/tissue response to stressors will help define their role in the complex cellular response to stressors and pathogenesis; however, the fidelity of spin trapping/immuno-detection and the effects of the spin trap on the biological system should be considered. This article is part of a Special Issue entitled Current methods to study reactive oxygen species - pros and cons and biophysics of membrane proteins. Guest Editor: Christine Winterbourn.

Indexed as

AnimalsBiochemistryFree RadicalsHumansImmunoglobulin GNitrogen OxidesProteinsSpin TrappingFree RadicalsImmunoglobulin GNitrogen OxidesnitronesProteins5,5-dimethyl-1-pyrroline N-oxideAGaminoglutethimideAnti-DMPObovine serum albuminBSADisease/exposure modelDMPOelectron spin resonanceESRhigh performance liquid chromatographyhoMbhorse myglobinHPLChuHb/Mbhuman hemoglobin/myoglobinimmuno-spin trappingImmuno-spin trappingI/Rischemia/reperfusionISTLClipopolysaccharideliquid chromatographyLPSmagnetic resonance imagingmass spectrometryMRIMSOAoctanoic acidProtein radicalReactive chemical speciesSODSpin trapsuperoxide dismutasethyroid peroxidaseTPO

Identifiers

PMID23644035
PMCPMC4078024
OpenAlexW1994871609

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.