Evidence map›Paper›PMID 23642045›Full record

ArticleRadiation research2013

Functional proteomics analysis to study ATM dependent signaling in response to ionizing radiation.

Amrita K Cheema, Rency S Varghese, Olga Timofeeva, Lihua Zhang, Alexander Kirilyuk, Fereshteh Zandkarimi, Prabhjit Kaur, Habtom W Ressom, Mira Jung, Anatoly Dritschilo

Open access · greenAbstract read
In one paragraph

Article in Radiation research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.7field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 11 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Human fibroblasts for large-scale "omics" investigations of ATM gene function.Advances in experimental medicine and biology · 2011
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Amrita K Cheema *Department of Oncology, Georgetown University Medical Center, Washington, DC.
Rency S Varghese *Department of Oncology, Georgetown University Medical Center, Washington, DC.
Olga TimofeevaDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Lihua ZhangDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Alexander KirilyukDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Fereshteh ZandkarimiDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Prabhjit KaurDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Habtom W RessomDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Mira JungDepartment of Radiation Medicine, Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, DC.
Anatoly DritschiloDepartment of Oncology, Georgetown University Medical Center, Washington, DC.
Georgetown University · USGeorgetown University Medical Center · US

Funding

THYMIDINE KINASE AND BRAIN TUMOR RADIATION RESISTANCEP01CA074175 · NCI · GEORGETOWN UNIVERSITY · PI DRITSCHILO, ANATOLY · 1997 to 2006
$13.2M
NCI NIH HHS P01 CA074175NCI NIH HHS P01CA74175NCI NIH HHS P30 CA5100
6 · The paper itself

Abstract

Ataxia telangiectasia (AT) is a human genetic disease characterized by radiation sensitivity, impaired neuronal development and predisposition to cancer. Using a genetically defined model cell system consisting of cells expressing a kinase dead or a kinase proficient ATM gene product, we previously reported systemic alterations in major metabolic pathways that translate at the gene expression, protein and small molecule metabolite levels. Here, we report ionizing radiation induced stress response signaling arising from perturbations in the ATM gene, by employing a functional proteomics approach. Functional pathway analysis shows robust translational and post-translational responses under ATM proficient conditions, which include enrichment of proteins in the Ephrin receptor and axonal guidance signaling pathways. These molecular networks offer a hypothesis generating function for further investigations of cellular stress responses.

Indexed as

ProteomicsAtaxia Telangiectasia Mutated ProteinsCell Cycle ProteinsCell LineDNA-Binding ProteinsGene Expression RegulationHumansProtein Processing, Post-TranslationalProtein Serine-Threonine KinasesSignal TransductionTumor Suppressor ProteinsAtaxia Telangiectasia Mutated ProteinsATM protein, humanCell Cycle ProteinsDNA-Binding ProteinsProtein Serine-Threonine KinasesTumor Suppressor Proteins

Identifiers

PMID23642045
PMCPMC4301981
OpenAlexW2059862249

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.