ArticleBreeding science2013
Multiple and independent origins of short seeded alleles of GS3 in rice.
Article in Breeding science, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.
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Who cites it
25 citing papers in PubMed, 44 citations in OpenAlex.
- The knockout of Gγ subunit HvGS3 by CRISPR/Cas9 gene editing improves the lodging resistance of barley through dwarfing and stem strengthening.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Review
- Oryza CLIMtools: A genome-environment association resource reveals adaptive roles for heterotrimeric G proteins in the regulation of rice agronomic traits.Plant communications · 2024Article
- Article
- Oryza CLIMtools: A Genome-Environment Association Resource Reveals Adaptive Roles for Heterotrimeric G Proteins in the Regulation of Rice Agronomic Traits.bioRxiv : the preprint server for biology · 2023Article
- Identification, Fine Mapping and Application of Quantitative Trait Loci for Grain Shape Using Single-Segment Substitution Lines in Rice (Plants (Basel, Switzerland) · 2023Article
- Yield-associated putative gene regulatory networks in Oryza sativa L. subsp. indica and their association with high-yielding genotypes.Molecular biology reports · 2022Article
- Article
- Discovery and Validation of Grain Shape Loci in U.S. Rice Germplasm Through Haplotype Characterization.Frontiers in genetics · 2022Article
- Grain Size Selection Using Novel Functional Markers Targeting 14 Genes in Rice.Rice (New York, N.Y.) · 2020Article
- Effect of multi-allele combination on rice grain size based on prediction of regression equation model.Molecular genetics and genomics : MGG · 2020Article
- InDel Marker Based Estimation of Multi-Gene Allele Contribution and Genetic Variations for Grain Size and Weight in Rice (International journal of molecular sciences · 2019Article
- Uncovering of natural allelic variants of key yield contributing genes by targeted resequencing in rice (Oryza sativa L.).Scientific reports · 2019Article
- Association Analysis of Three Diverse Rice (The plant genome · 2019Article
- Dissecting the Genetic Basis of Grain Size and Weight in Barley (Frontiers in plant science · 2019Article
- Characterization of Heterotrimeric G Protein γ4 Subunit in Rice.International journal of molecular sciences · 2018Article
- Identification of Heterotrimeric G Protein γ3 Subunit in Rice Plasma Membrane.International journal of molecular sciences · 2018Article
- Review
- A G-protein pathway determines grain size in rice.Nature communications · 2018Article
- Article
- Evolutionary Insights Based on SNP Haplotypes of Red Pericarp, Grain Size and Starch Synthase Genes in Wild and Cultivated Rice.Frontiers in plant science · 2017Article
Corrections and comments
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Authors and funding
8 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
GRAIN SIZE 3 (GS3) is a cloned gene that is related to seed length. Here we report the discovery of new deletion alleles at the GS3 locus, each of which confer short seed. We selected ten short seeded cultivars from a collection of 282 diverse cultivars. Sequence analysis across the GS3 gene in these ten cultivars identified three novel alleles and a known allele that contain several independent deletion(s) in the fifth exon of GS. These independent deletion variants each resulted in a frameshift mutation that caused a premature stop codon, and they were functionally similar to one another. Each coded for a truncated gene product that behaved as an incomplete dominant allele and conferred a short seeded phenotype. Haplotype analysis of these sequence variants indicated that two of the variants were of japonica origin, and two were from indica. Transformation experiments demonstrated that one of the deletion alleles of GS3 decrease the cell number in the upper epidermis of the glume, resulting in a significant reduction in seed length. The multiple and independent origins of these short seeded alleles indicate that farmers and early breeders imposed artificial selection favoring short seeds.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.