Evidence map›Paper›PMID 23640331›Full record

ArticleNucleic acids research2013

Progesterone receptor induces bcl-x expression through intragenic binding sites favoring RNA polymerase II elongation.

Paola Y Bertucci, A Silvina Nacht, Mariano Alló, Luciana Rocha-Viegas, Cecilia Ballaré, Daniel Soronellas, Giancarlo Castellano, Roser Zaurin, Alberto R Kornblihtt, Miguel Beato and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 16 citations in OpenAlex.

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  9. Argonaute-1 binds transcriptional enhancers and controls constitutive and alternative splicing in human cells.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Paola Y BertucciIFIBYNE-CONICET, Buenos Aires C1428EGA, Argentina.
A Silvina Nacht
Mariano Alló
Luciana Rocha-Viegas
Cecilia Ballaré
Daniel Soronellas
Giancarlo Castellano
Roser Zaurin
Alberto R Kornblihtt
Miguel Beato
Guillermo P Vicent
Adali Pecci
Centre for Genomic Regulation · ESPompeu Fabra University · ESInstituto de Biología Molecular y Celular de Rosario · ARUniversity of Buenos Aires · AR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Steroid receptors were classically described for regulating transcription by binding to target gene promoters. However, genome-wide studies reveal that steroid receptors-binding sites are mainly located at intragenic regions. To determine the role of these sites, we examined the effect of progestins on the transcription of the bcl-x gene, where only intragenic progesterone receptor-binding sites (PRbs) were identified. We found that in response to hormone treatment, the PR is recruited to these sites along with two histone acetyltransferases CREB-binding protein (CBP) and GCN5, leading to an increase in histone H3 and H4 acetylation and to the binding of the SWI/SNF complex. Concomitant, a more relaxed chromatin was detected along bcl-x gene mainly in the regions surrounding the intragenic PRbs. PR also mediated the recruitment of the positive elongation factor pTEFb, favoring RNA polymerase II (Pol II) elongation activity. Together these events promoted the re-distribution of the active Pol II toward the 3'-end of the gene and a decrease in the ratio between proximal and distal transcription. These results suggest a novel mechanism by which PR regulates gene expression by facilitating the proper passage of the polymerase along hormone-dependent genes.

Indexed as

Transcription Elongation, GeneticAlternative Splicingbcl-X ProteinBinding SitesCell Line, TumorChromatinCREB-Binding ProteinHumansp300-CBP-Associated Factorp300-CBP Transcription FactorsPositive Transcriptional Elongation Factor BPromegestoneReceptors, ProgesteroneRNA Polymerase IIbcl-X ProteinChromatinCREB-Binding ProteinCREBBP protein, humanp300-CBP-Associated Factorp300-CBP Transcription FactorsPositive Transcriptional Elongation Factor BPromegestoneReceptors, ProgesteroneRNA Polymerase II

Identifiers

PMID23640331
PMCPMC3695497
OpenAlexW2037208965

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.