Evidence map›Paper›PMID 23639873›Full record

ArticleVirology2013

O-GlcNAc modification of the coat protein of the potyvirus Plum pox virus enhances viral infection.

José de Jesús Pérez, Namrata D Udeshi, Jeffrey Shabanowitz, Sergio Ciordia, Silvia Juárez, Cheryl L Scott, Neil E Olszewski, Donald F Hunt, Juan Antonio García

Open access · greenAbstract read
In one paragraph

Article in Virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Frontiers in plant science · 2024
    Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Congenital disorders of glycosylation.Annals of translational medicine · 2018
    Review
  12. Sequence Analysis ofViruses · 2018
    Article
  13. Article
  14. Article
  15. Host Factors in the Infection Cycle ofFrontiers in microbiology · 2017
    Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

José de Jesús PérezDepartment of Plant Molecular Genetics, Centro Nacional de Biotecnología (CNB-CSIC), Campus Universidad Autónoma de Madrid, Darwin 3, Madrid, Spain.
Namrata D Udeshi
Jeffrey Shabanowitz
Sergio Ciordia
Silvia Juárez
Cheryl L Scott
Neil E Olszewski
Donald F Hunt
Juan Antonio García
Centro Nacional de Biotecnología · ESUniversity of Minnesota · USUniversity of Virginia · USBroad Institute · US

Funding

PROTEIN SEQUENCING BY TANDEM MASS SPECTROMETRYR01GM037537 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI HUNT, DONALD F · 1987 to 2023
$17.8M
NIGMS NIH HHS GM037537NIGMS NIH HHS R01 GM037537
6 · The paper itself

Abstract

O-GlcNAcylation is a dynamic protein modification which has been studied mainly in metazoans. We reported previously that an Arabidopsis thaliana O-GlcNAc transferase modifies at least two threonine residues of the Plum pox virus (PPV) capsid protein (CP). Now, six additional residues were shown to be involved in O-GlcNAc modification of PPV CP. CP O-GlcNAcylation was abolished in the PPV CP7-T/A mutant, in which seven threonines were mutated. PPV CP7-T/A infected Nicotiana clevelandii, Nicotiana benthamiana, and Prunus persica without noticeable defects. However, defects in infection of A. thaliana were readily apparent. In mixed infections of wild-type arabidopsis, the CP7-T/A mutant was outcompeted by wild-type virus. These results indicate that CP O-GlcNAcylation has a major role in the infection process. O-GlcNAc modification may have a role in virion assembly and/or stability as the CP of PPV CP7-T/A was more sensitive to protease digestion than that of the wild-type virus.

Indexed as

Protein Processing, Post-TranslationalAcetylglucosamineArabidopsisCapsid ProteinsDNA Mutational AnalysisNicotianaPlant DiseasesPlum Pox VirusPrunusAcetylglucosamineCapsid Proteinscoat protein, Plum pox virus

Identifiers

PMID23639873
PMCPMC4625898
OpenAlexW2045893226

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.