Evidence map›Paper›PMID 23637990›Full record

ArticlePloS one2013

An ultra high-throughput, whole-animal screen for small molecule modulators of a specific genetic pathway in Caenorhabditis elegans.

Chi K Leung, Ying Wang, Siobhan Malany, Andrew Deonarine, Kevin Nguyen, Stefan Vasile, Keith P Choe

Abstract read
In one paragraph

Article in PloS one, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed.

  1. Review
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  4. Article
  5. Chemical Genetics inACS chemical biology · 2024
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  13. PeerJ · 2022
    Article
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  15. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Chi K LeungDepartment of Biology and Genetics Institute, University of Florida, Gainesville, Florida, United States of America.
Ying Wang
Siobhan Malany
Andrew Deonarine
Kevin Nguyen
Stefan Vasile
Keith P Choe

Funding

A high throughput screen for inhibitors of nematode detoxification genesR21NS067678 · NINDS · UNIVERSITY OF FLORIDA · PI STRANGE, KEVIN · 2009 to 2012
$192k
NINDS NIH HHS 1R21NS067678NINDS NIH HHS R21 NS067678
6 · The paper itself

Abstract

High-throughput screening (HTS) is a powerful approach to drug discovery, but many lead compounds are found to be unsuitable for use in vivo after initial screening. Screening in small animals like C. elegans can help avoid these problems, but this system has been limited to screens with low-throughput or no specific molecular target. We report the first in vivo 1536-well plate assay for a specific genetic pathway in C. elegans. Our assay measures induction of a gene regulated by SKN-1, a master regulator of detoxification genes. SKN-1 inhibitors will be used to study and potentially reverse multidrug resistance in parasitic nematodes. Screens of two small commercial libraries and the full Molecular Libraries Small Molecule Repository (MLSMR) of ∼364,000 compounds validate our platform for ultra HTS. Our platform overcomes current limitations of many whole-animal screens and can be widely adopted for other inducible genetic pathways in nematodes and humans.

Indexed as

AcrylamideAnimalsCaenorhabditis elegansCaenorhabditis elegans ProteinsDose-Response Relationship, DrugDrug Evaluation, PreclinicalDrug StabilityGene Expression RegulationHeat-Shock ResponseHigh-Throughput Screening AssaysOxidative StressSmall Molecule LibrariesTetradecanoylphorbol AcetateAcrylamideCaenorhabditis elegans ProteinsSmall Molecule LibrariesTetradecanoylphorbol Acetate

Identifiers

PMID23637990
PMCPMC3639262

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.