Evidence map›Paper›PMID 23637598›Full record

ArticlePLoS pathogens2013

Genetic control of conventional and pheromone-stimulated biofilm formation in Candida albicans.

Ching-Hsuan Lin, Shail Kabrawala, Emily P Fox, Clarissa J Nobile, Alexander D Johnson, Richard J Bennett

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 64 papers.

0numbers the graph read from it
0cells of the map it votes in
64citing papers in PubMed
6.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

64 citing papers in PubMed, 96 citations in OpenAlex.

  1. Article
  2. Response ofmSphere · 2026
    Article
  3. Review
  4. Genetic and environmental control of parasexual reproduction in the pathogenicMicrobiology and molecular biology reviews : MMBR · 2025
    Review
  5. Review
  6. White-opaque switching inMicrobiology and molecular biology reviews : MMBR · 2024
    Review
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Journal of oral microbiology · 2021
    Article
  20. Parasexuality ofFrontiers in cellular and infection microbiology · 2021
    Review

4 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ching-Hsuan LinDepartment of Microbiology and Immunology, Brown University, Providence, Rhode Island, United States of America.
Shail Kabrawala
Emily P Fox
Clarissa J Nobile
Alexander D Johnson
Richard J Bennett
Brown University · USUniversity of California, San Francisco · US

Funding

Regulatory Circuits and Virulence in Candida albicansR01AI049187 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSON, ALEXANDER D · 2001 to 2021
$13.1M
Transcriptional Regulation of C. albicans Cell Fate and Host InteractionsR01AI081704 · NIAID · BROWN UNIVERSITY · PI Richard John Bennett · 2010 to 2026
$6.4M
The transcriptional circuitry controlling biofilm development in Candida albicansR01AI083311 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI JOHNSON, ALEXANDER D · 2011 to 2020
$4.3M
Phenotypic Switching in Candida albicans and its Role in PathogenesisR21AI081560 · NIAID · BROWN UNIVERSITY · PI BENNETT, RICHARD JOHN · 2009 to 2010
$442k
Parasexual Reproduction and Biofilm Formation in Candida albicansR56AI087401 · NIAID · BROWN UNIVERSITY · PI BENNETT, RICHARD JOHN · 2010 to 2010
$389k
Genetic Analysis of the Transcriptional Network Governing C. albicans BiofilmsK99AI100896 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NOBILE, CLARISSA JANE · 2012 to 2012
$127k
The transcriptional network controlling Candida albicans biofilm formationF32AI088822 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI NOBILE, CLARISSA JANE · 2010 to 2011
$107k
NIAID NIH HHS AI081560NIAID NIH HHS AI081704NIAID NIH HHS F32 AI088822NIAID NIH HHS F32AI088822NIAID NIH HHS K99AI00896NIAID NIH HHS K99 AI100896NIAID NIH HHS R01 AI049187NIAID NIH HHS R01 AI081704NIAID NIH HHS R01 AI083311NIAID NIH HHS R21 AI081560NIAID NIH HHS R56 AI087401
6 · The paper itself

Abstract

Candida albicans can stochastically switch between two phenotypes, white and opaque. Opaque cells are the sexually competent form of C. albicans and therefore undergo efficient polarized growth and mating in the presence of pheromone. In contrast, white cells cannot mate, but are induced - under a specialized set of conditions - to form biofilms in response to pheromone. In this work, we compare the genetic regulation of such "pheromone-stimulated" biofilms with that of "conventional" C. albicans biofilms. In particular, we examined a network of six transcriptional regulators (Bcr1, Brg1, Efg1, Tec1, Ndt80, and Rob1) that mediate conventional biofilm formation for their potential roles in pheromone-stimulated biofilm formation. We show that four of the six transcription factors (Bcr1, Brg1, Rob1, and Tec1) promote formation of both conventional and pheromone-stimulated biofilms, indicating they play general roles in cell cohesion and biofilm development. In addition, we identify the master transcriptional regulator of pheromone-stimulated biofilms as C. albicans Cph1, ortholog of Saccharomyces cerevisiae Ste12. Cph1 regulates mating in C. albicans opaque cells, and here we show that Cph1 is also essential for pheromone-stimulated biofilm formation in white cells. In contrast, Cph1 is dispensable for the formation of conventional biofilms. The regulation of pheromone- stimulated biofilm formation was further investigated by transcriptional profiling and genetic analyses. These studies identified 196 genes that are induced by pheromone signaling during biofilm formation. One of these genes, HGC1, is shown to be required for both conventional and pheromone-stimulated biofilm formation. Taken together, these observations compare and contrast the regulation of conventional and pheromone-stimulated biofilm formation in C. albicans, and demonstrate that Cph1 is required for the latter, but not the former.

Indexed as

BiofilmsCandida albicansDNA-Binding ProteinsFungal ProteinsGene ExpressionGene Expression Regulation, FungalPhenotypePheromonesSignal TransductionTranscription FactorsCPH1 protein, Candida albicansDNA-Binding ProteinsEFG1 protein, Candida albicansFungal ProteinsNdt80 protein, Candida albicansPheromonesTEC1 protein, Candida albicansTranscription Factors

Identifiers

PMID23637598
PMCPMC3630098
OpenAlexW2067315099

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.