Evidence map›Paper›PMID 23637404›Full record

ArticleJournal of virology2013

Structures of the procapsid and mature virion of enterovirus 71 strain 1095.

Javier O Cifuente, Hyunwook Lee, Joshua D Yoder, Kristin L Shingler, Michael S Carnegie, Jennifer L Yoder, Robert E Ashley, Alexander M Makhov, James F Conway, Susan Hafenstein

Abstract read
In one paragraph

Article in Journal of virology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

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  11. Evolutionary and Structural Overview of Human Picornavirus Capsid Antibody Evasion.Frontiers in cellular and infection microbiology · 2019
    Review
  12. Article
  13. Article
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  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Javier O CifuenteDepartment of Medicine, The Pennsylvania State University College of Medicine, Hershey, Pennsylvania, USA.
Hyunwook Lee
Joshua D Yoder
Kristin L Shingler
Michael S Carnegie
Jennifer L Yoder
Robert E Ashley
Alexander M Makhov
James F Conway
Susan Hafenstein

Funding

Overall (pp. 40-62)P41GM103485 · NIGMS · CORNELL UNIVERSITY · PI CERIONE, RICHARD A. · 2012 to 2018
$15.5M
Mechanisms of Enterovirus EntryR01AI107121 · NIAID · UNIVERSITY OF MINNESOTA · PI HAFENSTEIN, SUSAN · 2015 to 2024
$3.9M
Structural Studies of Virus and Receptor InteractionK22AI079271 · NIAID · PENNSYLVANIA STATE UNIV HERSHEY MED CTR · PI HAFENSTEIN, SUSAN · 2009 to 2010
$258k
NIAID NIH HHS K22 AI079271NIAID NIH HHS R01 AI107121NIGMS NIH HHS GM-103485NIGMS NIH HHS P41 GM103485PHS HHS K22 A179271
6 · The paper itself

Abstract

Enterovirus 71 (EV71) is an important emerging human pathogen with a global distribution and presents a disease pattern resembling poliomyelitis with seasonal epidemics that include cases of severe neurological complications, such as acute flaccid paralysis. EV71 is a member of the Picornaviridae family, which consists of icosahedral, nonenveloped, single-stranded RNA viruses. Here we report structures derived from X-ray crystallography and cryoelectron microscopy (cryo-EM) for the 1095 strain of EV71, including a putative precursor in virus assembly, the procapsid, and the mature virus capsid. The cryo-EM map of the procapsid provides new structural information on portions of the capsid proteins VP0 and VP1 that are disordered in the higher-resolution crystal structures. Our structures solved from virus particles in solution are largely in agreement with those from prior X-ray crystallographic studies; however, we observe small but significant structural differences for the 1095 procapsid compared to a structure solved in a previous study (X. Wang, W. Peng, J. Ren, Z. Hu, J. Xu, Z. Lou, X. Li, W. Yin, X. Shen, C. Porta, T. S. Walter, G. Evans, D. Axford, R. Owen, D. J. Rowlands, J. Wang, D. I. Stuart, E. E. Fry, and Z. Rao, Nat. Struct. Mol. Biol. 19:424-429, 2012) for a different strain of EV71. For both EV71 strains, the procapsid is significantly larger in diameter than the mature capsid, unlike in any other picornavirus. Nonetheless, our results demonstrate that picornavirus capsid expansion is possible without RNA encapsidation and that picornavirus assembly may involve an inward radial collapse of the procapsid to yield the native virion.

Indexed as

Models, MolecularCapsidCryoelectron MicroscopyCrystallography, X-RayEnterovirus A, HumanHumansUltrasonographyVirion

Identifiers

PMID23637404
PMCPMC3700288

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.