Evidence map›Paper›PMID 23637339›Full record

ArticlePlant physiology2013

Responses of Nannochloropsis oceanica IMET1 to Long-Term Nitrogen Starvation and Recovery.

Hong-Po Dong, Ernest Williams, Da-zhi Wang, Zhang-Xian Xie, Ru-ching Hsia, Alizée Jenck, Rolf Halden, Jing Li, Feng Chen, Allen R Place

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 47 papers.

0numbers the graph read from it
0cells of the map it votes in
47citing papers in PubMed
7.0field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

47 citing papers in PubMed, 167 citations in OpenAlex.

  1. Article
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  14. Proteomic and Transcriptomic Patterns during Lipid Remodeling inInternational journal of molecular sciences · 2020
    Article
  15. Article
  16. The MicroalgaPlant physiology · 2020
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Hong-Po DongResearch Center for Harmful Algae and Marine Biology, Jinan University, Guangzhou 510632, China.
Ernest Williams
Da-zhi Wang
Zhang-Xian Xie
Ru-ching Hsia
Alizée Jenck
Rolf Halden
Jing Li
Feng Chen
Allen R Place
University of Maryland, Baltimore · USArizona State University · USXiamen University · CNQingdao Institute of Bioenergy and Bioprocess Technology · CNUniversity of Maryland Center for Environmental Science · US

Funding

Translation regulation of gene expression in toxic dinoflagellatesR01ES021949 · NIEHS · CENTER FOR ENVIRONMENTAL SCIENCE · PI JAGUS, ROSEMARY, PLACE, ALLEN RICHARD · 2012 to 2016
$645k
NIEHS NIH HHS R01 ES021949
6 · The paper itself

Abstract

The Nannochloropsis genus contains oleaginous microalgae that have served as model systems for developing renewable biodiesel. Recent genomic and transcriptomic studies on Nannochloropsis species have provided insights into the regulation of lipid production in response to nitrogen stress. Previous studies have focused on the responses of Nannochloropsis species to short-term nitrogen stress, but the effect of long-term nitrogen deprivation remains largely unknown. In this study, physiological and proteomic approaches were combined to understand the mechanisms by which Nannochloropsis oceanica IMET1 is able to endure long-term nitrate deprivation and its ability to recover homeostasis when nitrogen is amended. Changes of the proteome during chronic nitrogen starvation espoused the physiological changes observed, and there was a general trend toward recycling nitrogen and storage of lipids. This was evidenced by a global down-regulation of protein expression, a retained expression of proteins involved in glycolysis and the synthesis of fatty acids, as well as an up-regulation of enzymes used in nitrogen scavenging and protein turnover. Also, lipid accumulation and autophagy of plastids may play a key role in maintaining cell vitality. Following the addition of nitrogen, there were proteomic changes and metabolic changes observed within 24 h, which resulted in a return of the culture to steady state within 4 d. These results demonstrate the ability of N. oceanica IMET1 to recover from long periods of nitrate deprivation without apparent detriment to the culture and provide proteomic markers for genetic modification.

Indexed as

AutophagyDown-RegulationEnzymesFatty AcidsGlycolysisLipid MetabolismMicroalgaeNitratesNitrogenPlastidsProteinsProteomicsStramenopilesEnzymesFatty AcidsNitratesNitrogenProteins

Identifiers

PMID23637339
PMCPMC3668043
OpenAlexW2147709159

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.